| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3729 |
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| Symbol | |
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| ID | 8134709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4209828 |
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| End bp | 4211390 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867029 |
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| Product | alkyl hydroperoxide reductase, F subunit |
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| Protein accession | YP_003019280 |
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| Protein GI | 253690090 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGACA ATACGATGAA AGTCCAGTTG AAAGCCTATC TGGAAAAATT AACCAAACCT
GTTGAGTTGA TTGCGACTCT GGATGACTCC GCGAAATCTG CTGAAGTCAG AACCTTGCTG
ACTGAAATCG CTGAGCTGTC TGAACGGGTA AGTTTTGTTG AAAAGAATGA GTTGGCAGTA
CGTAAGCCTT CATTCCTGAT TACCAATCCA GGTTCCCAGA GCGGCCCGCG TTTTGCCGGT
GCGCCAATGG GACATGAGTT TACCTCCCTG ATTCTGGCGT TATTGCAGGT GGGCGGCCAT
CCGTCGAAAG AAGCGAAAGA ATTACTCGAT CAAATACGTA ATCTTGACGG TGCGTTCCAC
TTTGAAACGT ATTACTCGCT GTCCTGCCAC AACTGCCCGG ACGTGGTGCA GGCACTGAAT
TTAATGGCGG TGCTGAATCC GAATATCACC CATACCGCGA TTGACGGTGG TGTGTTTCAG
GATGAAATCC AAAGCCGCAA TGTCATGGGT GTTCCGACCG TTTTCCTGAA CGGCGAACAC
TTTAGCCAGG GGCGGACGAG CCTCGCAGAG ATTGTGACTA AAATCGATAC CGGCGCGGGC
GCTAAGCAGG TCGAGAAGCT GAACCAGCGT GACGTCTATG ACGTGTTAAT CATCGGTAGC
GGCCCAGCAG GGGCAGCCGC GGCGGTCTAT TCGGCGCGTA AAGGTATTCG TACCGGTTTG
GTCGGTGAAC GTTTTGGCGG TCAGGTATTG GATACGGTTG ATATCGAAAA CTACATTTCT
GTTCCGAAAA CGGAAGGTGC CAAACTGGCG ACCGCGCTGA AGAGCCATGT TGATGACTAC
GATGTTGATG TGATCGATGC GCAGAGTGCA GAAGCCCTAA TTCCCGGTGG CGAACCCGGC
AAGCCGCATC AGGTGATAAC CGTATCCGGT GCGACGCTGA AAGCGCGTAG CGTGATTATT
GCAACCGGCG CGCGCTGGAG AAACATGAAT GTACCCGGCG AAGATCAGTA CCGTACGCGC
GGTGTAACGT ACTGTCCGCA CTGTGACGGT CCGCTGTTTA AAGGCAAACA CGTCGCGGTG
ATTGGCGGCG GGAACTCCGG TGTGGAAGCG GCTATCGATC TGGCTGGCGT GGTGAAACAT
GTCACGCTGC TTGAGTTTGC GCCGGAACTG AAAGCGGATT CGGTATTGCA GGACAAGGTG
CGTAGCCTGC CGAACGTTGA CATCATTCTG AATGCGCAAA CCACAGAAGT GAAAGGTGAT
GGACAGAAGG TAACGGGGCT GAGCTACAAA GATCGTATTA CCGATACGGT GCACGATTTA
GCGCTGGAAG GGATCTTCGT GCAGATTGGC CTACTGCCTA ACACCCACTG GCTGGAAGGA
ACGGTAGCCA GAAACCGCAT CGGTGAAATC GAGATCGATG CCAAATGCGA AACCAGCGTG
AAAGGGGTCT TTGCTGCCGG CGACTGTACG ACCGTGCCGT ACAAGCAGAT CATCATTGCG
ACGGGTGAAG GCGCAAAAGC GTCCCTGAGC GCCTTTGACT ACCTGATTAG AACTCGTGCG
TAA
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| Protein sequence | MLDNTMKVQL KAYLEKLTKP VELIATLDDS AKSAEVRTLL TEIAELSERV SFVEKNELAV
RKPSFLITNP GSQSGPRFAG APMGHEFTSL ILALLQVGGH PSKEAKELLD QIRNLDGAFH
FETYYSLSCH NCPDVVQALN LMAVLNPNIT HTAIDGGVFQ DEIQSRNVMG VPTVFLNGEH
FSQGRTSLAE IVTKIDTGAG AKQVEKLNQR DVYDVLIIGS GPAGAAAAVY SARKGIRTGL
VGERFGGQVL DTVDIENYIS VPKTEGAKLA TALKSHVDDY DVDVIDAQSA EALIPGGEPG
KPHQVITVSG ATLKARSVII ATGARWRNMN VPGEDQYRTR GVTYCPHCDG PLFKGKHVAV
IGGGNSGVEA AIDLAGVVKH VTLLEFAPEL KADSVLQDKV RSLPNVDIIL NAQTTEVKGD
GQKVTGLSYK DRITDTVHDL ALEGIFVQIG LLPNTHWLEG TVARNRIGEI EIDAKCETSV
KGVFAAGDCT TVPYKQIIIA TGEGAKASLS AFDYLIRTRA
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