Gene PC1_3702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3702 
Symbol 
ID8134682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4177597 
End bp4178613 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content52% 
IMG OID644867002 
Producterythrose 4-phosphate dehydrogenase 
Protein accessionYP_003019253 
Protein GI253690063 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.129908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCC GTATTGCGAT AAACGGTTTT GGCCGCATTG GCCGCAGTGT TTTACGTGCG 
TTGTATGAAT CAGGCCGCCG AGCCGAGATT ACCGTTGTGG CTATTAATGA GCTGGCAAGC 
GCGGAAGGTA TGGCGCATTT GCTCAAGTAC GACTCCAGCC ACGGCCGTTT TTCGTGGGAT 
GTGCGTCAGG AGTGTGACCA GCTTTATGTC GGTGATGATT GTATTCGTCT GTTACATCAG 
GCAGAGATTC AGGCATTGCC CTGGCGAGAA CTCGGTGTAG ATATCGTACT GGATTGCAGC 
GGTGTTTACG GTAGCCGGGA AGATGGCGAA GCCCATCTGG CGGCAGGTGC GAAGAAAGTG 
CTGTTTTCTC ATCCGGGAAC GGCGGATTTG GATGCGACGG TGGTGTTTGG CGTCAATCAC 
CAGCAGTTGG AACGTGAGCA TCGTATTGTT TCCAATGCGT CCTGTACGAC CAACTGCATT 
ATCCCGGTGA TCAAATTACT GGATGATGCC TTCGGGATCG AAAATGGCAC GGTGACGACG 
ATTCACTCAT CCATGAACGA TCAACCGGTG ATCGATGCTT ATCATCACGA TCTGCGGCGT 
ACACGTGCCG CCAGCCAGTC GATCATTCCG GTAGATACCA AGCTGTCGGC GGGGATCACC 
CGTATTTTTC CGCAGTTTGT CGATCGTTTT GAGGCGATAT CGGTGCGGGT GCCGACGATT 
AACGTCACGG CAATTGACCT GAGCGTTAGC GTCAGGAAAG CCGTAAACGT GAATGAAATT 
AATGCACTAT TGCAAAAATC AGCGCACGAG TCGTTTCGTG GTATAGTTGA TTATACTGAA 
TTGCCATTAG TGTCAGCTGA TTTTAACCAC GATCCGCACA GTGCCATTGT TGACGGCACG 
CAGACACGGG TCAGTGGTCA GCATCTGATT AAAACATTGG TCTGGTGCGA TAACGAATGG 
GGCTTTGCCA ACCGGATGTT GGATACAACA CGGGCGATGG CAGCCTGCGG TTTCTAG
 
Protein sequence
MTIRIAINGF GRIGRSVLRA LYESGRRAEI TVVAINELAS AEGMAHLLKY DSSHGRFSWD 
VRQECDQLYV GDDCIRLLHQ AEIQALPWRE LGVDIVLDCS GVYGSREDGE AHLAAGAKKV 
LFSHPGTADL DATVVFGVNH QQLEREHRIV SNASCTTNCI IPVIKLLDDA FGIENGTVTT 
IHSSMNDQPV IDAYHHDLRR TRAASQSIIP VDTKLSAGIT RIFPQFVDRF EAISVRVPTI 
NVTAIDLSVS VRKAVNVNEI NALLQKSAHE SFRGIVDYTE LPLVSADFNH DPHSAIVDGT 
QTRVSGQHLI KTLVWCDNEW GFANRMLDTT RAMAACGF