Gene PC1_3681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3681 
Symbol 
ID8134661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4155105 
End bp4156106 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content55% 
IMG OID644866981 
Productzinc-binding alcohol dehydrogenase family protein 
Protein accessionYP_003019232 
Protein GI253690042 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02817] zinc-binding alcohol dehydrogenase family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTTC ATGCGATAGC CGTTGATCCA CAACAGCCAG AAAATTTCAT CGCCATCACC 
CAAGACATCC CCGAGCCCGG TGAATACGAT CTGTTAATCG ACGTAAAAGC CATTTCCGTC 
AACCCGGTGG ATACCAAGGT GCATGCCGGA TTGCGCCAGA ATGGATTACA GCAGCCTAGA 
ATTCTCGGCT GGGATGCCAG CGGCGTCGTG CTGAAAACAG GCAGCGCCGT TAGCCAGTTT 
CGGGTAGGCG ATGAAGTCTG GTACGCCGGT GATATCACCC GTCCCGGCAG CAACACGACA 
CATCAGTTAA TTGATTCACG CATCGTCGCA CACAAGCCCG CGTCTCTCGA CTGGGCCGCA 
GCGGCTGCCA TGCCGCTCAC GGCGCTGACA GCGTGGGAAG GGCTGTTCGA GCACTTGAAA 
ATACAGCAGG CTGACAGCGA GAAAACGCTG CTGATTATCG GTGGTGCAGG CGGCGTAGGC 
TCCCTTGCGA TTTCTCTGGC AGCGCTGCGC AGTTCAGTGA ACATTATCGC TACTGCATCA 
AAGCCTGACT CGGCGGAATG GTGCCGCCAG CGTGGCGCAC ACAAGGTCGT GGATTACCGT 
AATTTGGTGG CTGAGCTAGA AAAAGAAGGG ATCAAACAGG TCGATTACAT TTTCTGTTTG 
AACGATACCG ACGGCCACTG GGAGGCGATC AGCAAGCTGA TCGCACCGAT GGGGCATATC 
TGTACCATCG TGGAAAACAA AAACCCGCTC GACCAAACGG CGCTGAAACT CAAAAGCGCG 
GCGCTACATT GGGAACTCAT GTTTACCCGC AGCATGTTTA CCACACCGGA TATCGCCGAA 
CAGGGGAACA TTTTGCACGA AGTCGCACAG CTGGTTGATG CTGGAAAACT TCAGGGAACC 
GCCAGCGAAA CGCTGCAAGG GTTAACGGTA GACACGCTGA AGCAAGCTCA CGATAAAGTG 
CTGGAAGGGC ATATGCGCGG CAAGATCGTT ATCGCGCTGT AA
 
Protein sequence
MTVHAIAVDP QQPENFIAIT QDIPEPGEYD LLIDVKAISV NPVDTKVHAG LRQNGLQQPR 
ILGWDASGVV LKTGSAVSQF RVGDEVWYAG DITRPGSNTT HQLIDSRIVA HKPASLDWAA 
AAAMPLTALT AWEGLFEHLK IQQADSEKTL LIIGGAGGVG SLAISLAALR SSVNIIATAS 
KPDSAEWCRQ RGAHKVVDYR NLVAELEKEG IKQVDYIFCL NDTDGHWEAI SKLIAPMGHI 
CTIVENKNPL DQTALKLKSA ALHWELMFTR SMFTTPDIAE QGNILHEVAQ LVDAGKLQGT 
ASETLQGLTV DTLKQAHDKV LEGHMRGKIV IAL