| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3677 |
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| Symbol | |
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| ID | 8134657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4148062 |
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| End bp | 4149987 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866977 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_003019228 |
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| Protein GI | 253690038 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.994757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGG GTCATTGGTG GTACGCCGTT GCGGCGATAT GTCTGGCTGG GGCCTCCGGC
CATGTGCTGG CGGATTCTCT GGACGAACAG CGTCAGCGCT ATCAGCAGGT TAAGCAAGCA
TGGGACAGCA ACCAAATGGA CACGGTAGCG CAGCTGATGC CGACGCTGCG CAGTTACCCG
CTTTATCCTT ATCTTGAATA CCGCTCGCTC ACGCAGGACC TGAGCCAGGT CAGCGCGACG
CAGGTGAGAC AGTTTATGGC AACGCATCCG ACGCTGCCGC CCGCCCGTAA TCTCACCACC
AGCTTTGTGA ATGAACTGGC GCGTCGTCAG GACTGGATCG GGCTGTTGGC ATTTAGTCCG
CAGCCACCGA AACCGGTCAG CGCCCGCTGT AACTTTTATT ATGCCCAGTG GGCCACTGGT
CAGCGTCAGG GCGTGTGGGA AGCCACGCGT GATATCTGGC TGACCGGGCG TTCTCTCCCT
GCCGTATGCG ATAAACTCTT CTCAGCCTGG CAGCAGGCGG GCGAACAGAC GCCGCTGACG
ACGCTGGAAC GCGCGCGTCT GGCGATGGAT GAAGGCAGTA GTAGTCTGGT GAGCTACCTC
ATCAAACAGT TACCCGACGA TTATAAAACG ATGGGTGATG CGCTACTAAA ACTCCAGAAC
GATCCGAATT CGCTGGAGAG CTTCGCTCGT AGCGTCGGGC CAACGGATTT CACCCGGAAA
GTCACTCTGT CGGCCTTTAC GCGCACGGCG CGTCAGGATG CCGATAATGC CCGTTCGATG
CTGCCAGTGA TTGTCCGTCT ACAGAAAATG AGCGCCGCAG AGCGTCAGGA GATGGAAGAA
ACTATTGCCT GGCGGTTGAT GGGCAACGAT GCCACCTCAG AGCAGGCACA ATGGCGGGAT
GGCGTGGTGC GGCGGAGTAC ATCGACCACC TTGCTGGAAC GCCGTGTACG GATGGCGTTG
GGCGCTGGCG ATCGTCAGGG ACTGACGAGC TGGATGGCGC GCTTGCCGGC AGAGGCGTTA
CAGAAAGATG AATGGCGTTA CTGGCGCGCG GTGGTGCTGT TGGATCAGGG CAAGCGTCAG
GAAGGTGAGA CGCTATTACG CAGCCTGATG CAGGAGCGCG GGTTCTATCC TATGGCGGCA
GCGCAGAAGC TTAACGAGCG CTACCCCATT ACGATCATGA CAGCGGTGAA GCCAGATCCT
TCTTTGTCCC AGCTACCGGA AGTCGCCCGT GTGCGGGAGT TGATGTTTTG GCAGATGGAT
AATCTGGCGC GCAGCGAGTG GGTCGGGCTG GTAGCGAACC GCAGCAAACC GCAGCAGGAA
GCGCTGGCTC GCTATGCGTT TGAACAGCGC TGGGCGGATT TGAGCGTGCA GGCAACGATT
GTCGCGAAGC TGTGGGATCA TCTGGAAGAA CGTTTCCCGC TGGCCTGGAA TGATGAATTC
CGCCGTGAAA CGCAGGGGAA AGGCATTAGC CAAAGCTATG CAATGGCGAT CGCACGTCAG
GAGAGCGCCT GGAACCCGAA AGCGCGTTCT CCAGTTGGTG CATCAGGCTT GATGCAGTTG
ATGCCCGCAA CGGCACAGCA TACTGCCAAA ATGAGCAATA TCACGTTCTA TACGAACAGC
AGCCAGCTGT TCGATCCTGA AACCAATATT CTGTTGGGAA CGAGCTATCT GGAGTACGTG
TACCAGACAT TTGGCCGTAA CCGCATTCTG TCTTCCGCGG CTTATAACGC TGGGCCGTCG
CGCGTGAATA CCTGGTTGAG AAACAGTGCG GGACGCATCG ATCCCGTTGC GTTCATCGAA
AGTATTCCGT TTTCGGAAAC ACGGGGCTAC GTGAAAAATG TACTGGCTTA TGACGTCTTC
TATCGTTATT TCCTGCACCA GCCCGCCAAT GTGCTGACAG ATGCGGAATG GCAGCGGCGT
TATTGA
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| Protein sequence | MKAGHWWYAV AAICLAGASG HVLADSLDEQ RQRYQQVKQA WDSNQMDTVA QLMPTLRSYP
LYPYLEYRSL TQDLSQVSAT QVRQFMATHP TLPPARNLTT SFVNELARRQ DWIGLLAFSP
QPPKPVSARC NFYYAQWATG QRQGVWEATR DIWLTGRSLP AVCDKLFSAW QQAGEQTPLT
TLERARLAMD EGSSSLVSYL IKQLPDDYKT MGDALLKLQN DPNSLESFAR SVGPTDFTRK
VTLSAFTRTA RQDADNARSM LPVIVRLQKM SAAERQEMEE TIAWRLMGND ATSEQAQWRD
GVVRRSTSTT LLERRVRMAL GAGDRQGLTS WMARLPAEAL QKDEWRYWRA VVLLDQGKRQ
EGETLLRSLM QERGFYPMAA AQKLNERYPI TIMTAVKPDP SLSQLPEVAR VRELMFWQMD
NLARSEWVGL VANRSKPQQE ALARYAFEQR WADLSVQATI VAKLWDHLEE RFPLAWNDEF
RRETQGKGIS QSYAMAIARQ ESAWNPKARS PVGASGLMQL MPATAQHTAK MSNITFYTNS
SQLFDPETNI LLGTSYLEYV YQTFGRNRIL SSAAYNAGPS RVNTWLRNSA GRIDPVAFIE
SIPFSETRGY VKNVLAYDVF YRYFLHQPAN VLTDAEWQRR Y
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