Gene PC1_3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3617 
Symbol 
ID8134597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4079514 
End bp4080443 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content56% 
IMG OID644866917 
ProductNmrA family protein 
Protein accessionYP_003019168 
Protein GI253689978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.392591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATA GCGGACCCGC GTTGAAAGAT ATTCTTGTGC TTGGTGCAGG GCAGCTCGGT 
ATGGCGGTAT TGCGTGCTCT CGCGCCGCGT GCGCGAGCCT TGCAGTTGTC GGTTACGGCA 
CTGGTCTCAC CGGGCACCAT TACCGATCCG TCGGAGCAGA ATAGGGCAAC ACTGGCCGAA 
CTCCGCGCTC TGGGGGTTGA CGTGATGGGG GTCGATCTGG CCTCGGATGA ACATACCCTG 
ACGGGGCTTT TCGGGAATTA TAAGACGATA GTGAACTGTT CGGGATTCGT TGCAGGGCCT 
GGCACTCAGA TGAAAATAAC CAGAGCGGTG TTGGCTGCCA ACGTCACGCG CTATTTCCCC 
TGGCAGTTTG GCGTTGACTA TGACGTCGTT GGTCGAAACA GCGGGCATCC AGTTTTTGAT 
GAGCAGTACG ACGTGAGGCA GTTGCTGCGC GGCCAGCAAC GTACCGAATG GGTGGTTGTC 
TCGACGGGCA TGTTCACGAG TTTCCTGTTT GAACCCGCCT TTGATGTGGT GGATCTGGAA 
CGCGGAACCC TTCACGGTCT GGGGAGTTGG GATACCAAAG TGACCGTGAC AATCCCCGAA 
GACATTGGCT GGCTCACGAC GGAAATCTTG CTGGCTGAAC CACGCCTGGT TAATGAGGTG 
GTCTACGTGG CAGGCGACAC GATTTCATAC GGGCAGCTTG CTGGTGTCGT TGAACATGTC 
ACGGGAAGGG CGTTTGAGAA GACCGTATGG ACGCTGGAAA AATTGCGCGC AGACCTGAAG 
GCTGCTCCAG ATGACGTCAT GACGCGCTAC CGGGCAGCGT TCGCTTTGGG TGAGGGGATG 
TGGTGGGACA AATCCGGTAC GTTCAATCAA CGTAATGGCT ACGAGACGGT CGACGTCGAG 
CATTTCTTGC GGATGCAACT GCAAAAATAG
 
Protein sequence
MNDSGPALKD ILVLGAGQLG MAVLRALAPR ARALQLSVTA LVSPGTITDP SEQNRATLAE 
LRALGVDVMG VDLASDEHTL TGLFGNYKTI VNCSGFVAGP GTQMKITRAV LAANVTRYFP 
WQFGVDYDVV GRNSGHPVFD EQYDVRQLLR GQQRTEWVVV STGMFTSFLF EPAFDVVDLE 
RGTLHGLGSW DTKVTVTIPE DIGWLTTEIL LAEPRLVNEV VYVAGDTISY GQLAGVVEHV 
TGRAFEKTVW TLEKLRADLK AAPDDVMTRY RAAFALGEGM WWDKSGTFNQ RNGYETVDVE 
HFLRMQLQK