| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3582 |
|---|
| Symbol | |
|---|
| ID | 8134562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 4038484 |
|---|
| End bp | 4038879 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644866882 |
|---|
| Product | nucleoside triphosphate pyrophosphohydrolase |
|---|
| Protein accession | YP_003019133 |
|---|
| Protein GI | 253689943 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00586] mutator mutT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000334964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAA AACAGTTATC CGTCGCGGTA GGCATCATCC GCAATGTGGA ACAGCAATAT
TTCATTGCTC GTCGCCCTGA TGGCGTTCAT ATGGCAGGGA TGTGGGAGTT TCCCGGCGGG
AAAATTGAAG AGGGGGAAAC GCCAGAACAA GCGTTGATTC GTGAACTGCG TGAAGAAACG
GGCATCGATG CTAGCGCACC GCAGTCGCTA AACGACAAAA CGTTTTCTAC GCCGGAAAGA
ATTATTACGC TCCATTTCTT CCTGGTTGAA ACGTGGCAGG GTGAACCCTA TGGTCGGGAA
GGTCAGGAAT CTCGCTGGGT GAGCGTAGAA GAATTGCGTG AGGAAGAATT TCCGCCAGCG
AATGCGGAGA TGATCCGCTG GCTGAAATCG CTTTAA
|
|---|
| Protein sequence | MTQKQLSVAV GIIRNVEQQY FIARRPDGVH MAGMWEFPGG KIEEGETPEQ ALIRELREET
GIDASAPQSL NDKTFSTPER IITLHFFLVE TWQGEPYGRE GQESRWVSVE ELREEEFPPA
NAEMIRWLKS L
|
|---|
| |