| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3570 |
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| Symbol | |
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| ID | 8134550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4026653 |
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| End bp | 4028011 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866870 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003019121 |
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| Protein GI | 253689931 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATC AACAAACGGA CGGCACGCTA AAGCGTGGTT TGAAAAACCG TCATATTCAG
TTGATTGCCT TGGGTGGCGC GGTAGGTACT GGCCTCTTTC TTGGTATTGC GCAAACGATC
AAAATGGCCG GACCGTCGGT CCTGCTAGGC TATGCGATTG GCGGCCTGAT CGCATTTCTC
ATTATGCGCC AGTTAGGCGA AATGGTGGTT GAAGAACCGG TAGCCGGATC GTTCAGCCAC
TTTGCTTATA AATACTGGGG CGATTTCGCG GGCTTTGCAT CGGGATGGAA CTACTGGGTA
CTGTATGTTC TTGTCGCCAT GGCCGAGCTC AGCGCCGTGG GGATTTACGT CCAGTACTGG
TGGCCAGACA TCCCAACGTG GGTATCTGCT GCCGTATTCT TCCTGTTGAT TAACGCCATC
AATCTGGCAA ACGTCAAAGT CTACGGTGAG ATGGAGTTCT GGTTTGCCAT CATCAAAGTC
GCCGCGATTA TTGGCATGAT CGTCTTCGGC GGCTGGCTGC TGCTCAGCGG TACGGGCGGG
CCGGAAGCCA CCGTGACCAA CCTGTGGGCC CAGGGCGGGT TCTTCCCGAA CGGCGTGCTC
GGCCTGGTGA TGGCGATGGC CGTTATCATG TTCTCATTTG GCGGGCTGGA ACTGGTAGGG
ATTACCGCAG CAGAAGCGGA TGACCCAGAG AAAAGCATTC CACGCGCGAC CAATCAGGTT
ATCTACCGCA TCCTGATTTT CTACATCGGT TCACTCGCTA TCCTGCTGTC ACTTTACCCA
TGGGGCAAGG TTGTAGAAGG CGGTAGCCCG TTCGTCATGA TTTTCCATGA ACTGAACAGT
AACGTCGTAG CAACGGTGCT GAACATCGTG GTACTGACCG CCGCGCTGTC CGTTTACAAC
AGCTGTGTGT ACTGTAACAG TCGCATGCTG TTCGGTCTGG CGAAACAGGG TAATGGACCA
AAAGTACTGC AAACCGTCGA TCGCCGTGGC GTGCCGGTTG TCGCTATCGG TATCTCCGCG
CTGGCGACAG CGCTGTGCGT ACTAATCAAC TACCTCATTC CCGGTAAAGC CTTCGAGCTG
CTGATGGCGC TGGTCGTGTC CGCGCTTGTG ATTAACTGGG CGATGATCAG TCTGGCGCAC
CTGAAGTTCC GCGCGCAAAA GGACAAAGAA GGCACCGTGA CCAAGTTTAA GGCACTGTTT
TACCCGCTGG GTAACTACAT CTGCCTGCTG TTCCTGGCCG GTATACTGGT CATCATGTTC
CTGACACCGG GCATTCAGAT TTCCGTCATG CTGATTCCGG TCTGGCTGAT TATTCTGGGT
GTAGGCTACT TCATCAAAAA GAAAAATCAG GTGAACTAA
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| Protein sequence | MDNQQTDGTL KRGLKNRHIQ LIALGGAVGT GLFLGIAQTI KMAGPSVLLG YAIGGLIAFL
IMRQLGEMVV EEPVAGSFSH FAYKYWGDFA GFASGWNYWV LYVLVAMAEL SAVGIYVQYW
WPDIPTWVSA AVFFLLINAI NLANVKVYGE MEFWFAIIKV AAIIGMIVFG GWLLLSGTGG
PEATVTNLWA QGGFFPNGVL GLVMAMAVIM FSFGGLELVG ITAAEADDPE KSIPRATNQV
IYRILIFYIG SLAILLSLYP WGKVVEGGSP FVMIFHELNS NVVATVLNIV VLTAALSVYN
SCVYCNSRML FGLAKQGNGP KVLQTVDRRG VPVVAIGISA LATALCVLIN YLIPGKAFEL
LMALVVSALV INWAMISLAH LKFRAQKDKE GTVTKFKALF YPLGNYICLL FLAGILVIMF
LTPGIQISVM LIPVWLIILG VGYFIKKKNQ VN
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