Gene PC1_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3520 
Symbol 
ID8134500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3964645 
End bp3965694 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content60% 
IMG OID644866821 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003019072 
Protein GI253689882 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAC TCAAGGATAT TGCCGACCGC GCCGGGGTTT CTATTAGCAC GGTTTCCCGC 
GCGCTGAACG GCACGGCGCC GATCAGCGCC AAAGTCAGGC AGCACATCAT GGCGATTGCC 
ACTGAGCAGG GTTATCCGCT GCATAAAGTG GCTAAAGCGA CCGTTGCGCA GACGGAACCG 
CTGCGCCACA TTCTGCTGGC GACGCCGCGC AACCTGATGC TGGAGAGCGA GTACAATCTG 
GTGTCGCTGA CGCTGATTAA CGCCCTGAAA ACGTTGTGTT TGCAACGTAA TATCCAACTG 
CGTCCGTTTT TGGGGGAGCA TGACACCATT AACGAACAGC AGTTGCTGCG CGAGCTTCAG 
GGCGGAAAAG AGAGTGGTAT CCTGATCGTT AATGACGATC ACCCGACGCT GCTGAATGCC 
GTGGCGGAAA GCGGGATCCC GGCGGTGCTG ATCAACGGTG AAGATCCCTC GATGCGGCTG 
AGCAGCGTCA CGCCCGCCAA CCATTATGCG GCGGCGGCGG GAGTGCGTTA CCTGATCGAG 
CAAGGGCATA CGCGGATCCT GCACCTGACC TGGACGTCGC GTATGACGAT CAAACAGCGC 
GAGCGCGGCT ATCGGGATGC GCTCATGCAG GCGGGTATTG CGGTGGATGA GGATCTGATC 
CTCTCGCTAC CGGATTTCCA TCCGCGCACG GCGCGTGATG CGCTATTGCG TTGGTTGACG 
GCGAACCCTG ACAGACTGGG GGTTACCGCG ATTTTCTGTG CGGCGGATAA TCAGGCCATC 
GGCGTGATCG ACGCGCTGTA TCAGCACGGA CTACGGGTGC CGGAAGACAT GTCGGTGATG 
GGAATGGACG ACATCCTGCC GTTCGATATG TTGCCGGTTT CACTCACCAC GGTGCATCTG 
CCATTTGAAA CGATTGCCCG TGCGGCGCTA CAGCTGCTGG CGCAGCAAAT GACGCCCGCA 
CAGGCGCTCG GTATTGCCCA GCGCACCGAG CTGGCCGGAC AGGTGGTGGT CAGAGAGTCG 
GTACGGCGGG TGGGAAGTCA TACCGGTTGA
 
Protein sequence
MATLKDIADR AGVSISTVSR ALNGTAPISA KVRQHIMAIA TEQGYPLHKV AKATVAQTEP 
LRHILLATPR NLMLESEYNL VSLTLINALK TLCLQRNIQL RPFLGEHDTI NEQQLLRELQ 
GGKESGILIV NDDHPTLLNA VAESGIPAVL INGEDPSMRL SSVTPANHYA AAAGVRYLIE 
QGHTRILHLT WTSRMTIKQR ERGYRDALMQ AGIAVDEDLI LSLPDFHPRT ARDALLRWLT 
ANPDRLGVTA IFCAADNQAI GVIDALYQHG LRVPEDMSVM GMDDILPFDM LPVSLTTVHL 
PFETIARAAL QLLAQQMTPA QALGIAQRTE LAGQVVVRES VRRVGSHTG