| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3480 |
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| Symbol | |
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| ID | 8134460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3924677 |
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| End bp | 3926623 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866781 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_003019032 |
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| Protein GI | 253689842 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACG CGATCTTTTC AAACGATCTC AACGATCCTG TACAGGCCAG AAAGCGTGAG
CTGGACGCCG TTATTACGGT GGCGGCGGGG GATATGGATG CCTCCCTTGC CACGGTCGCG
CGCTTTGAAT CTGAACTGGC TGACTGGGCT GGGTTTGCAA CATGTGTAGG GACGTCGTCT
GATACCGGAG GCGTCAGCGT CATGCTCGGC GCCCTTGATC TCCGGCCCGG CGATGAGGTG
ATCGTGGGCC CAGGTATTCC GGCATGGGTC ACGTCGCCTT TGGTGCATGC GGGGTTGATT
CCGGTAGCCG CGGATGATGA GGCTGACACG CTGGGCGTAC AATTGGCCTC GTTCGAGCAG
CGATTCAGTG ACAGAACCCG AGCCGTGCTG GTTTCTTCCT CTTTTCTATA CCATCAGGAT
ATCGCTCACG TCATTGCGCT AAGCCGGGCG AAGCAATTGG TCACGATTGT CGAACTGACT
GCTTCTATTG GCACGATGCT TGACCACCGG CAGATCGTTG AGGGATTCGA TATCGGGATT
TTGTCCTTGC GGGAAGGCGT TTCCGCCATT TCTACGGGCG AAGGGGGAGC CGTGTTTTTT
CGCCATCGAG AATGGGGCCG CCGAGCGAAA AGCTACTCTC AATTCTCCGA TCTGGATGGG
ATAAATGTAG GCGTTAATCA CAAGATCAGC GGCATCCAGT GTGCTGTCGG GTGGCATCGC
TTACAGGCGC TGATGGCAAA AAATGTGGCG TATAGCGCGG CAGATTCCCG AATGGATGCG
GATGGCCAAC ATCCTGCCAG TGAATCGTTG TCACCCGCTG TGGACGCTGA CGTTGTCGGC
AGCGCCCCCG CCATTAAAGA CAGTTTTTAC CCTGTTGGCA CCCGCGAAGA GGCGTTTGTG
CTGGCCGCCT TGAACAGCGG TATCGGAGGA CGATCCGATA CCGTTCGCCA ATACGAACAG
CAGCTAAAAA CGCATTTCAA TGCCGGACAT GCTATTGCCA CATCATCGGG ATATGGCTCG
CTCGTTGTCG CACTGTCTGC CTTTGGCCTC AAACCGGGGG ACAAAGTGCT GTTAACGCCG
ACATGTCCGC TGTGCACGGT ATACGCCCTC ACGTTTATGC GAGTCGAACC GGTATTTTGC
GATATCAGCC CGGATGATTT CACCATCGAT CTGGCTATGG CAGAACGCAT GATCGACGGC
AAAACCAGAG CGATTATCGA TATCCCGATG TGGGGATATC CGGTTGATGC GAAGCGGGTG
GCTGCGTTTG CACGTGCGAA AGGGTTGTAT TACCTGCTGG ATATCGCATT GGCGCACAAG
GCCAAACTGG ATGGCGAATT CCTCTGGAAA TATGCCGATA TGGCGACGTT TTCCACGCAC
CACAGCAAAA CGCTGGTCAC CGGCGAGGGT GGGGCGGTGC TGACGGATAA CGACGAGCTG
GCGCTGAAGG CAAAGCAGTT CACGCACTGT GATTTCACCG CCTCTCGCAA TCCTGTCTTG
AATTTCTCTC TAAGCGGTTT ACAAGCCGCG CTGGGGCTGG CGCGACTCCA TCGACTGGAA
CAGGATGTGC AGCATCGTCT GTCTACTATG CAGACGCTCG GCAAATTGCT GACCAACCCG
CACCTTGAAC CGTTACCGAT TATCTCTGGC GGCGAGCCCG CTGGCACCAA ACTGCTCGTG
CGGTCGCTCA CGGGCGACAA TGACGCTTTA CTTGAACATC AGTCCCGCGC CGGTATCCCT
TCGGATATCG CACTGTATAA CTGTAAGGCG CTGTACCAGT ATCCCGTTTT ACGTGACAAA
GCCACGCCGT GCCCGAATGC GGAGCGGATG CTGGCGACCA TCACCACCTT ACCTGTTCAC
CCGGATATCC GACAGGCTGA CATCGCGGTG ATCGCATCGG TACTCAATCG CTTTCAACCT
GAGCATTCGG AGGAAGTTCT GTCATGA
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| Protein sequence | MDDAIFSNDL NDPVQARKRE LDAVITVAAG DMDASLATVA RFESELADWA GFATCVGTSS
DTGGVSVMLG ALDLRPGDEV IVGPGIPAWV TSPLVHAGLI PVAADDEADT LGVQLASFEQ
RFSDRTRAVL VSSSFLYHQD IAHVIALSRA KQLVTIVELT ASIGTMLDHR QIVEGFDIGI
LSLREGVSAI STGEGGAVFF RHREWGRRAK SYSQFSDLDG INVGVNHKIS GIQCAVGWHR
LQALMAKNVA YSAADSRMDA DGQHPASESL SPAVDADVVG SAPAIKDSFY PVGTREEAFV
LAALNSGIGG RSDTVRQYEQ QLKTHFNAGH AIATSSGYGS LVVALSAFGL KPGDKVLLTP
TCPLCTVYAL TFMRVEPVFC DISPDDFTID LAMAERMIDG KTRAIIDIPM WGYPVDAKRV
AAFARAKGLY YLLDIALAHK AKLDGEFLWK YADMATFSTH HSKTLVTGEG GAVLTDNDEL
ALKAKQFTHC DFTASRNPVL NFSLSGLQAA LGLARLHRLE QDVQHRLSTM QTLGKLLTNP
HLEPLPIISG GEPAGTKLLV RSLTGDNDAL LEHQSRAGIP SDIALYNCKA LYQYPVLRDK
ATPCPNAERM LATITTLPVH PDIRQADIAV IASVLNRFQP EHSEEVLS
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