| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3469 |
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| Symbol | |
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| ID | 8134449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3913727 |
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| End bp | 3915064 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866770 |
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| Product | PTS system, lactose/cellobiose family IIC subunit |
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| Protein accession | YP_003019021 |
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| Protein GI | 253689831 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.868513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTA AGGACCAACT GATTGATTCA TTGGGCTCCT TTGCCAATAA ATTTAACAGT
CTGCGTTACA TTATGGCGAT TAAGGCATCC TTTATTACGC TGATGCCCGT CATTATCGTC
GGGGCGTTCT CCGTTCTGAT TTCCAACATG GTGATGGATC CGAAAAATGG TCTGGCCAGT
TTTTCCATGT TTTCTTTTCT GGCTGAACTT AAACCGATTA TGAGCGGCAT TAACTATGCC
ACGCTCAGCT TTCTGACTAT CGGTGCCGTT TTCCTGATTG GTATCGAACT TGGGAAGATT
AACGGTTCAC GCGGGCTGTT TCCCGGCCTG CTGGCGGTGA TCTGCTTTAT TGCCGTGACG
CCAACCACGA TCGAAATGGC CGTCAACGGG CAGATGATGG TGGTGAAAGA CGTGCTGGCG
AAACAGTTCT CCGATACGAA GAGCCTGTTT CTGGGGATGT TTATCGCCAT CCTGTCTGTC
GAGATGTATA CCAAGCTACA AAATGTCGAT CGGCTGCAGA TTAAAATGCC GGACAGTGTG
CCGCCCAACG TCGCGGCCTC TTTTTCCGCG CTGTTTCCTT CCATCATCAC GGTTGTCGCT
ATCGCCACCT TCGGGTTTGT GTTTCACCGC GTGACGGGCA TGTATCTGTA TGACGCCGTT
TATAAAGTTG TACAGCAGCC GCTGGAATCC GTGGTGCAGA GCTTGCCCGG TTTACTGGTG
CTGATGTTCG TCGCTCAGTT GTTCTGGGTG ATCGGGATTC ACGGCAACCA GATGATTAAG
CCGATTCGTG AACCGCTGCT GCTGGGGGCG ATTGCCGTCA ACATGACCGC GTTCGAGCAG
GGGCATGAGA TACCGAACAT TATCACCATG CCGTTCTGGG ATGTGTACAT GAGCATCGGC
GGTTCCGGCC TGACCATTGG CCTGCTGCTG GCGGTGATGA TTGCGTCTAA ACGCAAAGAG
ATGAAAGAGA TCGCCAAAAT TTCTTTCGGC CCCAGCGTGT TCAATATTAA TGAGCCGGTG
ATTTTTGGTA TGCCGATTAT GCTCAACCCG ATTCTGGCTA TTCCCTTCAT TATCACACCG
TTAGTGACGG GCACGATTGG TTATTTCGCC ACCAGTATGG GGTTTGCGGG TAAAGCGGTG
GTGATGGTGC CGTGGACAAC GCCGCCGATC ATTAACGCCT GGCTGTCGAC CGCAGGTTCA
ATGGGCGCGG TCGCCACACA GATCGTGTGC ATCATGGTGG CAACGCTGAT CTATCTGCCG
TTTGTCAAAG TCGCGTCCCG TCGTGCCGAG CTGGCGCAGT TGGAAGCGGA AAAACAGACC
GCAGCGGAAA AAGCCTGA
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| Protein sequence | MSFKDQLIDS LGSFANKFNS LRYIMAIKAS FITLMPVIIV GAFSVLISNM VMDPKNGLAS
FSMFSFLAEL KPIMSGINYA TLSFLTIGAV FLIGIELGKI NGSRGLFPGL LAVICFIAVT
PTTIEMAVNG QMMVVKDVLA KQFSDTKSLF LGMFIAILSV EMYTKLQNVD RLQIKMPDSV
PPNVAASFSA LFPSIITVVA IATFGFVFHR VTGMYLYDAV YKVVQQPLES VVQSLPGLLV
LMFVAQLFWV IGIHGNQMIK PIREPLLLGA IAVNMTAFEQ GHEIPNIITM PFWDVYMSIG
GSGLTIGLLL AVMIASKRKE MKEIAKISFG PSVFNINEPV IFGMPIMLNP ILAIPFIITP
LVTGTIGYFA TSMGFAGKAV VMVPWTTPPI INAWLSTAGS MGAVATQIVC IMVATLIYLP
FVKVASRRAE LAQLEAEKQT AAEKA
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