Gene PC1_3442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3442 
Symbol 
ID8134422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3885812 
End bp3886210 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content50% 
IMG OID644866743 
Producthypothetical protein 
Protein accessionYP_003018994 
Protein GI253689804 
COG category[S] Function unknown 
COG ID[COG3766] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.280161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATTG TTACGTCGCT ACTCGCTTTC GCCTCTTATT TCTTTATCGG GTTTGCCATG 
GTGCTGGCCT TTCTGTTTAT CTACACCCGC GTTACGCCGC ATGATGAATG GGCGCTGATT
AAAGAGAATA ATGGTACGGC AGCCATTGGG TTTGGTGGGG CGTTAATTGG CTATGTGATC
CCGCTTTCCA GTGCGGCGAT TAATTCCGTG AGTCTGGTGG ATTACATTAC CTGGGGCGTG
GTTGCGCTGG TGGTGCAATT ACTGATTTAT TTCGCTGTGC GCCTGTATAT GCCGCGTCTT
AGCCAGCATA TCCAGAATAA CGATGTTGCC TCTGGTGCCT TTCTTTGTGC CGCCTCGCTT
AGCGGCGGGA TTCTGAATGC GGCGTGTATG TCGTATTAA
 
Protein sequence
MPIVTSLLAF ASYFFIGFAM VLAFLFIYTR VTPHDEWALI KENNGTAAIG FGGALIGYVI 
PLSSAAINSV SLVDYITWGV VALVVQLLIY FAVRLYMPRL SQHIQNNDVA SGAFLCAASL
SGGILNAACM SY