Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3442 |
Symbol | |
ID | 8134422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3885812 |
End bp | 3886210 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644866743 |
Product | hypothetical protein |
Protein accession | YP_003018994 |
Protein GI | 253689804 |
COG category | [S] Function unknown |
COG ID | [COG3766] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.280161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATTG TTACGTCGCT ACTCGCTTTC GCCTCTTATT TCTTTATCGG GTTTGCCATG GTGCTGGCCT TTCTGTTTAT CTACACCCGC GTTACGCCGC ATGATGAATG GGCGCTGATT AAAGAGAATA ATGGTACGGC AGCCATTGGG TTTGGTGGGG CGTTAATTGG CTATGTGATC CCGCTTTCCA GTGCGGCGAT TAATTCCGTG AGTCTGGTGG ATTACATTAC CTGGGGCGTG GTTGCGCTGG TGGTGCAATT ACTGATTTAT TTCGCTGTGC GCCTGTATAT GCCGCGTCTT AGCCAGCATA TCCAGAATAA CGATGTTGCC TCTGGTGCCT TTCTTTGTGC CGCCTCGCTT AGCGGCGGGA TTCTGAATGC GGCGTGTATG TCGTATTAA
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Protein sequence | MPIVTSLLAF ASYFFIGFAM VLAFLFIYTR VTPHDEWALI KENNGTAAIG FGGALIGYVI PLSSAAINSV SLVDYITWGV VALVVQLLIY FAVRLYMPRL SQHIQNNDVA SGAFLCAASL SGGILNAACM SY
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