22 homologs were found in PanDaTox collection
for query gene PC1_3440 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_3440  putative biofilm stress and motility protein A  100 
 
 		 102 aa  209  1e-53  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.259857  n/a   
 
 
-
 
NC_012912  Dd1591_0771  putative biofilm stress and motility protein A  44.55 
 
 		 122 aa  86.7  1e-16  Dickeya zeae Ech1591  Bacteria  normal  0.0137672  n/a   
 
 
-
 
NC_009708  YpsIP31758_3642  putative biofilm stress and motility protein A  48.57 
 
 		 103 aa  86.3  1e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_3787  putative biofilm stress and motility protein A  48.57 
 
 		 103 aa  86.3  1e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_4660  putative biofilm stress and motility protein A  41 
 
 		 109 aa  81.3  0.000000000000004  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  0.749494 
 
 
-
 
NC_009832  Spro_0443  putative biofilm stress and motility protein A  44.83 
 
 		 102 aa  80.9  0.000000000000006  Serratia proteamaculans 568  Bacteria  normal  1  hitchhiker  0.000468468 
 
 
-
 
NC_010658  SbBS512_E4719  putative biofilm stress and motility protein A  41 
 
 		 142 aa  80.5  0.000000000000007  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_4749  putative biofilm stress and motility protein A  41 
 
 		 142 aa  80.5  0.000000000000007  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A4433  putative biofilm stress and motility protein A  41 
 
 		 142 aa  80.5  0.000000000000007  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C4797  putative biofilm stress and motility protein A  43.3 
 
 		 100 aa  79.3  0.00000000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A4647  putative biofilm stress and motility protein A  43.3 
 
 		 100 aa  79.3  0.00000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B4657  putative biofilm stress and motility protein A  43.3 
 
 		 100 aa  79.3  0.00000000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_5705  putative biofilm stress and motility protein A  40 
 
 		 109 aa  77  0.00000000000007  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011080  SNSL254_A4740  putative biofilm stress and motility protein A  42.22 
 
 		 100 aa  77  0.00000000000008  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.613855  normal  1 
 
 
-
 
NC_009436  Ent638_0368  putative biofilm stress and motility protein A  39.22 
 
 		 102 aa  75.9  0.0000000000002  Enterobacter sp. 638  Bacteria  normal  0.883495  normal  0.028319 
 
 
-
 
CP001509  ECD_04056  hypothetical protein  41 
 
 		 109 aa  73.9  0.0000000000006  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_012892  B21_04018  hypothetical protein  41 
 
 		 109 aa  73.9  0.0000000000006  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_3804  protein of unknown function DUF1471  41 
 
 		 109 aa  73.9  0.0000000000006  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3824  putative biofilm stress and motility protein A  40 
 
 		 109 aa  73.2  0.000000000001  Escherichia coli ATCC 8739  Bacteria  normal  1  hitchhiker  0.000180133 
 
 
-
 
NC_011205  SeD_A4776  putative biofilm stress and motility protein A  43.33 
 
 		 100 aa  73.2  0.000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012880  Dd703_0791  putative biofilm stress and motility protein A  45.68 
 
 		 109 aa  64.3  0.0000000005  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A0686  putative lipoprotein  46.3 
 
 		 53 aa  55.1  0.0000003  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>