Gene PC1_3423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3423 
Symbol 
ID8134403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3871963 
End bp3872346 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content49% 
IMG OID644866724 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003018975 
Protein GI253689785 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.201208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC GCTATGATGT TTATGCGCAG CATTGCCCGA CCCGCATGAT TTTGGATCGC 
GTGGCGGATA AATGGACGTT GCTGATCCTG AATATTCTGG TTGAACGGCC GATGCGCTTT
AATCAGTTAA AACGCGATGT AGAAGGGATT TCACAAAAGG TATTGTCGCA AACGCTGAAG
AATTTGGTGC GTGACGGTTT CGTCGAACGT ACGGTCTTCC CAACCATTCC GGTGACGGTG
GAATACGCCT CGACCGTGAT GGGAAAAACG TTGGCCAAAC CGATTGCCGA GCTGACGTAC
TGGGCGGAAC AGAATATGGA TAATGTGCTG TTATCCCAGC AGAAGTTTGA TGCGTCAGCG
AATAGTGCGG CTGAACCGCT GTAA
 
Protein sequence
MNKRYDVYAQ HCPTRMILDR VADKWTLLIL NILVERPMRF NQLKRDVEGI SQKVLSQTLK 
NLVRDGFVER TVFPTIPVTV EYASTVMGKT LAKPIAELTY WAEQNMDNVL LSQQKFDASA
NSAAEPL