Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3423 |
Symbol | |
ID | 8134403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3871963 |
End bp | 3872346 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644866724 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003018975 |
Protein GI | 253689785 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.201208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAC GCTATGATGT TTATGCGCAG CATTGCCCGA CCCGCATGAT TTTGGATCGC GTGGCGGATA AATGGACGTT GCTGATCCTG AATATTCTGG TTGAACGGCC GATGCGCTTT AATCAGTTAA AACGCGATGT AGAAGGGATT TCACAAAAGG TATTGTCGCA AACGCTGAAG AATTTGGTGC GTGACGGTTT CGTCGAACGT ACGGTCTTCC CAACCATTCC GGTGACGGTG GAATACGCCT CGACCGTGAT GGGAAAAACG TTGGCCAAAC CGATTGCCGA GCTGACGTAC TGGGCGGAAC AGAATATGGA TAATGTGCTG TTATCCCAGC AGAAGTTTGA TGCGTCAGCG AATAGTGCGG CTGAACCGCT GTAA
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Protein sequence | MNKRYDVYAQ HCPTRMILDR VADKWTLLIL NILVERPMRF NQLKRDVEGI SQKVLSQTLK NLVRDGFVER TVFPTIPVTV EYASTVMGKT LAKPIAELTY WAEQNMDNVL LSQQKFDASA NSAAEPL
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