| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3381 |
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| Symbol | |
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| ID | 8134361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3811707 |
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| End bp | 3812597 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644866682 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003018933 |
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| Protein GI | 253689743 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTCA TTCGTCTACG CACATTTGTG GAAGTCTATC GACAGCGCTC GATTAGCGGG
GCGTCGCGCG CGCTTAATCT GACTCAGCCT GCGGTGTCAC AGCACATTGC CGGGCTGGAG
GTGGCAGTGG GGCGGCGTCT CTTTGAACGT CAGGCAAACG GCGTGACGCC AACATCGGCG
GCAGACGATC TGGCGGCAGA TCTGGGCGAT AAGCTTGATG AAGCCGAGGC GGCACTGGCT
TCCGCGCGCG CGCGATCAAT GGACGTCGCG GGGACGCTGC ATATCATTGG CCATGCAGAT
TTCATGGCCG AAGTGGTATC GGAGCAGCTA TTACCGCTGC TTGAGGCGGG TGTGCGGGTG
CATATGCATA CTGGCGATGG CGATTTGATT AAACAGATGC TGCTGGAAGG ACACTGTGAT
TTGGGTATCA CGGCGCACCC GGTGACGGAT AAGCGGCTGA AAAGCGATTT GCTAAAGAGT
GCGACGCTAC AGGCGGTGGC GGCACCTGCG ATTGTCGAAC GGCTATTGCA GGCCGGTGAC
TTGCCACAGG CGCTGGCTCA GGAACCGATG CTGGCGTATG ACCTTGAGCT TCCCCTGATT
GATCACTGGC TGAAGAAGAA CCGCATGGAG GATAAGGGGC TGCTGCCTGC CGTGGTGAGT
CAGGATCTGC GTGCGCTGCG TCGCGTGCTG ACCAGCGGAT TTGGCTGGAC GGTCATGCCG
GTGTATTTAT GTCAGGATCT GCTGGATGCC GGGAAACTTG TGATTATCCC GCCACCCGTC
GGTACTACAC AGCTGGATTA CTATCTGGCC TGGGTGCCGG GCGCGCTGCG CCAGCCGCGT
TTAGCCCATG CGCGGCAGAC CTTCCTGTGG CGATTACAGC ACGCGGAGTA A
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| Protein sequence | MSLIRLRTFV EVYRQRSISG ASRALNLTQP AVSQHIAGLE VAVGRRLFER QANGVTPTSA
ADDLAADLGD KLDEAEAALA SARARSMDVA GTLHIIGHAD FMAEVVSEQL LPLLEAGVRV
HMHTGDGDLI KQMLLEGHCD LGITAHPVTD KRLKSDLLKS ATLQAVAAPA IVERLLQAGD
LPQALAQEPM LAYDLELPLI DHWLKKNRME DKGLLPAVVS QDLRALRRVL TSGFGWTVMP
VYLCQDLLDA GKLVIIPPPV GTTQLDYYLA WVPGALRQPR LAHARQTFLW RLQHAE
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