| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3347 |
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| Symbol | |
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| ID | 8134327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3774598 |
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| End bp | 3776316 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644866648 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_003018899 |
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| Protein GI | 253689709 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0134098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACTA GCCAATACAT GCTCTCCACT CTCAAGGAGA CGCCAGCCGA TGCAGAAGTC
ATCAGCCATC AGTTGATGCT CCGGGCAGGA ATGATTCGTA AACTGGCCTC AGGCCTTTAC
ACTTGGTTGC CGACCGGTTT ACGTGTTTTG AGAAAAGTTG AAAACATCGT GCGCGAAGAG
ATGAACAACG CTGGCGCTAT TGAAGTTTCC ATGCCCGTTG TTCAGCCTGC CGATTTATGG
GTAGAAAGTG GACGTTGGGA TCAATATGGC CCAGAACTAC TGCGCTTTGT CGATCGTGGC
GAGCGCCCTT TCGTACTCGG CCCAACGCAT GAAGAAGTCA TTACTGATCT GATTCGTAAT
GAAATCAGCT CCTACAAGCA GTTGCCGCTG AATTTCTTCC AGATTCAAAC CAAATTCCGC
GATGAAGTCC GCCCGCGTTT TGGCGTGATG CGCTCACGTG AATTCCTGAT GAAAGATGCC
TACTCTTTCC ATACCTCTCA GGAATCATTG CAGGTCACCT ACGATGCCAT GTACGCGGCC
TACAGCCAGA TTTTCAGCCG TATGGATCTG GATTTCAGAG CCGTTCAGGC AGATACCGGT
TCTATCGGCG GTAACGCATC CCATGAGTTT CAGGTACTGG CTGCCAGCGG TGAAGACGAT
ATCGTTTTCT CAACGGACTC CGACTACGCG GCAAACATTG AACTGGCAGA AGCCGTTGCG
CCAAAGCTAG GCCGTGCAGA AGCGAAGGAA GAGCTGCATC TGGTTGATAC GCCGAACGCG
AAAACCATCG CCGAACTGGT TGAGCAATTT AAGTTACCAG TAGAAAAAAC GGTGAAAACG
CTGCTGGTTA AAGCCACGGA AGAAAGCGGT CATAAGCTGG TTGCGTTGCT GGTTCGTGGC
GATCACGAAC TGAACGAAAT TAAAGCGGAA AAAATTGCTC AGGTAGCTAG CCCACTGACG
TTTGCAACCG AAGAAGAGAT TCGTGCCACC ATCGGCGCTG GCCCAGGTTC ACTTGGCCCG
GTCAAGCTGT CGATTCCAGT CGTTGTCGAC CGCACCGTTG CGGCCATGAG CGACTTCAGC
GCTGGCGCGA ACATTGATGG TAAACACTAT TTTGGCATCA ACTGGGAGCG TGACGTTGCG
CTGCCGCAGG TTGCGGATAT CCGTAACGTG GTTGAAGGTG ACATCAGTCC AGACGGTAAA
GGCACGCTGC AAATTAAACG CGGTATCGAA GTGGGCCATA TCTTCCAACT GGGCAGCAAA
TATTCTGAAG CGTTGAAAGC GACGGTTCAA GGTGAAGATG GCCGTAACCA GACGCTGACG
ATGGGCTGCT ACGGTATCGG TGTAACGCGT GTTGTTGCAG CAGCGATTGA GCAGAATCAT
GACGAACGCG GCATCATCTG GCCAGATGCG ATTGCACCTT TCCACGTTGC TATTCTGCCA
ATGAACATGC ACAAGTCTTT CCGGGTGAAG GAAGTCGCTG AGGATATCTA TCAGCAGCTG
CGCGCTAAAG GCATTGAAGT TCTGCTTGAT GACCGCAAAG AGCGTCCGGG TGTGATGTTC
GCCGATATGG AGTTGATTGG TGTACCGCAC ACCATCGTCA TTGGCGATCG TAATCTGGAT
AGCGAAGAGA TTGAATATAA GCATCGCCGG ATTGGTGAAA AGCAGATGAT TAAAACCAAC
GAAATCGTCG ATTTCCTGCT GGCAAATATC GTTCGCTAA
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| Protein sequence | MRTSQYMLST LKETPADAEV ISHQLMLRAG MIRKLASGLY TWLPTGLRVL RKVENIVREE
MNNAGAIEVS MPVVQPADLW VESGRWDQYG PELLRFVDRG ERPFVLGPTH EEVITDLIRN
EISSYKQLPL NFFQIQTKFR DEVRPRFGVM RSREFLMKDA YSFHTSQESL QVTYDAMYAA
YSQIFSRMDL DFRAVQADTG SIGGNASHEF QVLAASGEDD IVFSTDSDYA ANIELAEAVA
PKLGRAEAKE ELHLVDTPNA KTIAELVEQF KLPVEKTVKT LLVKATEESG HKLVALLVRG
DHELNEIKAE KIAQVASPLT FATEEEIRAT IGAGPGSLGP VKLSIPVVVD RTVAAMSDFS
AGANIDGKHY FGINWERDVA LPQVADIRNV VEGDISPDGK GTLQIKRGIE VGHIFQLGSK
YSEALKATVQ GEDGRNQTLT MGCYGIGVTR VVAAAIEQNH DERGIIWPDA IAPFHVAILP
MNMHKSFRVK EVAEDIYQQL RAKGIEVLLD DRKERPGVMF ADMELIGVPH TIVIGDRNLD
SEEIEYKHRR IGEKQMIKTN EIVDFLLANI VR
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