Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3288 |
Symbol | frsA |
ID | 8134261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3705003 |
End bp | 3706253 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644866582 |
Product | fermentation/respiration switch protein |
Protein accession | YP_003018840 |
Protein GI | 253689650 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGCAAG CTAACCTGTC TGAAACGCTA TTCAAACCAT CCTTTAAACA TCCAGAAACC TCGACGCTGG TCCGACGTAC GCGAAATAGT CAGGACGTGC AGGGGCTGCA TTCTACGCTG GAAGGGGAAA AGACCCGCAG TTGGTATCGC ATGATTAACC GGCTGATGTG GATTTGGCGT GGCGTCGACC CGTGGGAAAT CGAAGACGTG CTGTCGCGTA TCGCGGCCAG CAAGGCCGAC AGAAGCAACG AGCAACTGCT TGATACGGTG ATCGGCTACC GCGGCGGTAA CTGGATTTAT GAATGGGCGA AGCAGGGCGC AGACTGGCAG CAGCGAGCAA CAGAAAGCGG CGATGATGCG CAAACCGGAC AATTCTGGCT GAACGCAGCC AATCTCTACA GCATTGCTGC CTATCCGCAT ATTAAAGGCG ATGAGCTGGC AGAGCAGGCG CAAACGCTGG CAAACCGCGC CTATGAAGAG GCCGCCAAGT ATCTGCCTTA TGAACTCAAA GAACTGACGT TCCCCATTGC GGGCGGCGGT ACGCTGACCG GTTTTCTGCA TATGCCATCG CAGGCGAAAG CGCCTTTCCC TACTGTGCTT ATGTGCGGCA GTCTGGAAAT GCTGCAGAGC GATTATCATC GCCTGTTTCA GGACTATTTT GCGCCGGCAG GCATGGCAAT GCTGACGATT GATGTTCCCT CCGTTGGATT TTCTTCCCGC TGGAAACTGA CTCAGGATTC CAGTTTCCTG CATCAGCAGC TCTTGCGCGC GCTGCCGGAT GTCCCGTGGG TCGATCACTC GCGCGTTGTG GCGTTTGGTT TCCGCTTTGG CGCCAATATT GCCGTTCGGC TGGCGTATCT GGAATCGCAG CGCTTACGTG GTGTGGCCTG TCTCGGCCCT TTGGTGCATC ACCTATTAAG CGATTCGACT CGCCAGCAGC AGGTGCCTGA TATGTTTATG GATGTGTTAG CGAGTCGTCT GGGTATGCCG TTCTCGACGG ATACCTCGCT GAAAACCGAG CTGGGACGTT ATTCGCTGAA AACGCAGGGG TTACTCGGAC GTCGCTGCCC GACGCCAATG CTGGCAGGCT ACTGGGATAA CGATCCGCTG TGCCCGAAAG AAGAGGCCAG CCTGATAGTG AACTCATCCG CACAAGGGAA ACTGCTGCCG GTTAACTTCT CGCCGGTGTA CCAGAATTTC GATCGCGCGC TACAGCAAAT CAGCGGATGG TTGCAGGATA AAGTGTGTTA A
|
Protein sequence | MAQANLSETL FKPSFKHPET STLVRRTRNS QDVQGLHSTL EGEKTRSWYR MINRLMWIWR GVDPWEIEDV LSRIAASKAD RSNEQLLDTV IGYRGGNWIY EWAKQGADWQ QRATESGDDA QTGQFWLNAA NLYSIAAYPH IKGDELAEQA QTLANRAYEE AAKYLPYELK ELTFPIAGGG TLTGFLHMPS QAKAPFPTVL MCGSLEMLQS DYHRLFQDYF APAGMAMLTI DVPSVGFSSR WKLTQDSSFL HQQLLRALPD VPWVDHSRVV AFGFRFGANI AVRLAYLESQ RLRGVACLGP LVHHLLSDST RQQQVPDMFM DVLASRLGMP FSTDTSLKTE LGRYSLKTQG LLGRRCPTPM LAGYWDNDPL CPKEEASLIV NSSAQGKLLP VNFSPVYQNF DRALQQISGW LQDKVC
|
| |