Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3269 |
Symbol | |
ID | 8134241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3686089 |
End bp | 3688416 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644866564 |
Product | P4 family phage/plasmid primase |
Protein accession | YP_003018823 |
Protein GI | 253689633 |
COG category | [R] General function prediction only |
COG ID | [COG3378] Predicted ATPase |
TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.592172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACACC TTACCGTGAC ACAGACTGTG AAACGCGCCA GCGGCCACTG GCCGCAACTG CTCCCGGCAG TGGGTATCCG GATTGATGCC ACCGGGCAGC ATACCGCCTG CCCGATGTGT GAGGGCAAAG ACCGTTTTCG CTTCGATAAC AAAGAAGGGC GTGGCACATG GATTTGTAAC CAGTGCGGCG CGGGTGACGG CTTGAATCTG GTGGAAAAAA CCCTGAAACT GACGCCGACA GAAGCCGCCC TGACAGTGGG CGCGTGGCTG GGTGACCTGC CGGACAGCCC GGCAGCGTCA ACACAAGATG AAGAAGACAG CGAGGCCGCC CGGCAACGGG CGGCAGTTCA GGCACAGGCA AAGCTGAAAG AAGCTGTGAC ACAACCCGGT AACGCATATC TCTGTGCCAA AGGCTGGCCG GATATCGCGG TGCCGACCCT ACAGGGTAAG CCGCTGCGCG TGGGCGGTAT CACCTATCAG CCCGGCGATG TACTGGTGCC GCTGACCACA CCGGACGGTG AGGTGGTGAA TCTCCAGCTT ATCAACGCAC AGGGCGACAA GCGCACGTTA AAAGGCGGAC AGGTGAAAGG TGCCTTTCAC TGTTTCAGCG GCAAACAGGC CAGTGTTATC TGGCTGGCCG AAGGCTATGC CACCGGCTTA ACGCTGCATC AGTTAACCGG TGATGCGGTG TATGTCGCGC TCAGCGCGAA CAACCTGCCG TCCCTTGCCC GTGAGCTGAA AACCCGCCAC CCTTCGGCCA CGCTGCTGAT AGCCGCTGAC CGGGACGAGA ACGGCACCGG CCAGACCAAA GCCGAACAGG CCGCCGTTGC CGTCAATGGC CGTGTCGCGC TGCCGCCGGT GTTTGGTGAC TGGAATGATG TGTATCTTGC TGAGGGTGCC GACGCCACCC GGCAGCACCT GAATGCGTTT ACCCAACCAG AGCCTGTCAG CCCGTTTGAG TCGCTGGGCG AGGCCGAATT CAAGGCCATG AGCGCCAGCG AGAAAGCGGA GAAGATACGC GAACACTACC GCGACACGCT GGCAATTGAT GCGTTCGGGG AAACGTTCTT CCAGTATCAG AACGGCGCAT GGAAAGTCCT TCCCCATCGT CTGTTAAGCC GGGATATCGC CGCGCTGTTT CAGAAGATAC AGGCACCCTT TACCGCAGCG GGTATAGACA GTGTGATAAA CACCCTGAAA CTGATTGTTC CGATGCAGGA AGCCTCCCAG CGCCGGTTAA TCGGCTTTCG TAACGGCGTG TTTGATACCG CCAGCGGTGA ATTTAAACCG CATCGCCGGG AGCACTGGTT ACATACCGTC AATGACGTGG ATTACACCCC GTTTAAGGCC GGGGAAAACC TTGCCGACAA TGCGCCGCAC TTCTGGCGCT GGCTGACCCG TGCCGCCGGG AACCACCCGG ATAAACAGGA GCGTATTCTG GCCGCGCTGT TTATGGTGCT GGCGAACTGC TATGACTGGC AACTGTTCCT TGAAGTCACC GGCCCCGGCG GCAGCGGAAA GAGTATTCTG GCGGAAATTA CCACTATGCT GGCCGGGGAC GATAACACCA CAGCGGCAAC CATCAACACC ATTGAATCGT CCCGTGAGCG TTCGTCGATT ATTGGCTTCT CACTCATCGT ACTGCCGGAT CAAGAGAAAT GGAGCGGTGA CGGCGCAGGT ATCAAGGCCA TTACCGGCGG CGATGCGGTG ATGGTTGACC CGAAATACCG TGACGCCTAT TCCACCCGTA TTCCGGCGGT GATTCTGGCC GTCAACAACT CGCCGATGCG TTTTAGCGAC CGCAGCGGCG GCGTATCCCG TCGTCGAGTG ATTATCCATT TTGGTGAAAC CATCCCAGCC AGCGAACGCG ATCCCAAGCT GAAAGAGAAA ATCCGCGCAG AGCTGGCGGT GATAGTGCGT CACCTGATGA AACGCTTTGA AGAGCCAAAC GACGCCCGGA CGCTGTTACA GGCGCAGCAA CACTCCGCTG AGGCGCTGGA AATCAAACGG CAGGCTGATC CGCTGGTTGA TTTTTGCGGC TACCTGCTGG CTCACAGCGA CACCACCGGG CTGTATATGG GCAACGCCAA CATCACACCG CGTAACCCGC GTAAGTACCT GTACCACGCC TATCTGTCCT TTATGGAATC GCACGGCCAC CAGAAGCCGA TCAGCCTGAC GGCCTTTGGT AAGGTACTGC CTAACATGAT GTCGGAATAC GGGCAGAGTT ACCTCAAGGG CAGAACCAAG CAGGGCATAC AGACTAACCT TGAGCTGAAA GACGAATCAG ACGCCGACTG GCTGCCTAAA TGCGAATCGG CGAGGTAG
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Protein sequence | MAHLTVTQTV KRASGHWPQL LPAVGIRIDA TGQHTACPMC EGKDRFRFDN KEGRGTWICN QCGAGDGLNL VEKTLKLTPT EAALTVGAWL GDLPDSPAAS TQDEEDSEAA RQRAAVQAQA KLKEAVTQPG NAYLCAKGWP DIAVPTLQGK PLRVGGITYQ PGDVLVPLTT PDGEVVNLQL INAQGDKRTL KGGQVKGAFH CFSGKQASVI WLAEGYATGL TLHQLTGDAV YVALSANNLP SLARELKTRH PSATLLIAAD RDENGTGQTK AEQAAVAVNG RVALPPVFGD WNDVYLAEGA DATRQHLNAF TQPEPVSPFE SLGEAEFKAM SASEKAEKIR EHYRDTLAID AFGETFFQYQ NGAWKVLPHR LLSRDIAALF QKIQAPFTAA GIDSVINTLK LIVPMQEASQ RRLIGFRNGV FDTASGEFKP HRREHWLHTV NDVDYTPFKA GENLADNAPH FWRWLTRAAG NHPDKQERIL AALFMVLANC YDWQLFLEVT GPGGSGKSIL AEITTMLAGD DNTTAATINT IESSRERSSI IGFSLIVLPD QEKWSGDGAG IKAITGGDAV MVDPKYRDAY STRIPAVILA VNNSPMRFSD RSGGVSRRRV IIHFGETIPA SERDPKLKEK IRAELAVIVR HLMKRFEEPN DARTLLQAQQ HSAEALEIKR QADPLVDFCG YLLAHSDTTG LYMGNANITP RNPRKYLYHA YLSFMESHGH QKPISLTAFG KVLPNMMSEY GQSYLKGRTK QGIQTNLELK DESDADWLPK CESAR
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