Gene PC1_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3236 
Symbol 
ID8134208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3645164 
End bp3645943 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content47% 
IMG OID644866533 
ProductAnkyrin 
Protein accessionYP_003018792 
Protein GI253689602 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATGGT TGGCACGTAT AAAATGGGTA GGCGTCGTTA TTCTGGGATT ATTAACCGCT 
TGTCAGGCAG GAGGACACAG TATGCGGGCG AGTGAGCTTT TTGAGCCATC TGTTGTGTCA
GTATTAGAGA GCATTCAAAA AGGTGACGAA ACGACAGCCC GTCATCAGCT GTCGCAGGGC
GTTAACCTGA ATATTCAGGG GAAAGAAGGC ATCACGCCGC TGCTGTGGCT GATTTATGAA
ACGAAGGATA AAAAGGCCGT CACGCTGGCG CTTAAACTGG GTGTCGATCC AAACTATAAA
GATGGATCGG GTGATAGTGC GGTGAACCGA GTATCTGGTT TTAAAGATCC TGACTGGCTG
CGTATTATTC TAGATGCAGG TGGCGATCCG AATGCAATTG GGCGCCTTGG GCAGCCAGCA
ATATTTAGTG CTATTAATGA AGAACGCTGG GCTGATATAA AATTACTTGT GGAACGTGGG
GCTGACGTCA ATTTGACGGA TGAGCAAAAA ACCAATAGCG CTCATTATGC TGCTTATCTG
AACCAGTATG AAATATCATA TTGGTTGATT GAGCAGGGCG CTAATGTTAA TACCTATTCG
GCTACAGGGG CTAGCTTAGC CTGGAGTGTT GAAGACAGCT TATCCATTAT GTCCCCTAAA
TCTCCTCACT ATCCTTGGGC GCTGAAGGTA AAACAGCTGT TGCTGGATCG TGGCGTTAAA
TTCCCGCCGC TGCCACCTGC TGAAGTTCGA GAACGTTGGG AAAAAGGGCT GCCGTTATAA
 
Protein sequence
MQWLARIKWV GVVILGLLTA CQAGGHSMRA SELFEPSVVS VLESIQKGDE TTARHQLSQG 
VNLNIQGKEG ITPLLWLIYE TKDKKAVTLA LKLGVDPNYK DGSGDSAVNR VSGFKDPDWL
RIILDAGGDP NAIGRLGQPA IFSAINEERW ADIKLLVERG ADVNLTDEQK TNSAHYAAYL
NQYEISYWLI EQGANVNTYS ATGASLAWSV EDSLSIMSPK SPHYPWALKV KQLLLDRGVK
FPPLPPAEVR ERWEKGLPL