Gene PC1_3197 details

Gene Information

• Locus tag: PC1_3197
• ID: 8134164
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 3606621
• End bp: 3607106
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644866492
• Product: P2 GpU family protein
• Protein accession: YP_003018756
• Protein GI: 253689566
• COG category: [R] General function prediction only
• COG ID: [COG3499] Phage protein U

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00170121
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCTCA CATTAGGGCT GTTTGTGTTC CAGCTCCAGA CCCTGCCCTA CCAGAACATG 
CAGCGCAACG TTGATTACCG CTGGCCGTCA AACAGTCGCG TTGGTCAGCG TCCGGCGTTG 
CAGTTTTTAG GCATTGAGGA AGAGAAAATC ACGCTATCGG GGGAGTTATT GCCGGAAATC 
ACAGGCGGCA CGCTGTCATT GTTGATGCTG GAGACGATGG CCGATCAGGG GCGCGCATGG 
CCGCTGATTG AGGGCAGCGG CACCATTTAC GGCGTGTTTG TGGTGAACAG TATCAGCCAG 
ACGAAAACCG ACTTTTTCAC CGATGGCCGG GCCCGGCGGA TTGAGTTCAC CATCACATTA 
ACCCGCGTGG ACTCGTCATT GTCTGCCATG CTGGGCGATT TACGCCAGCA GGCGGAGGGC 
TTGATCGGCA GCGCCGGGGA AATGGCTAAC CGGGCGCAAT CCGCTGTCGG GGGTTTATTC 
GCATGA 

 

Protein sequence

MMLTLGLFVF QLQTLPYQNM QRNVDYRWPS NSRVGQRPAL QFLGIEEEKI TLSGELLPEI 
TGGTLSLLML ETMADQGRAW PLIEGSGTIY GVFVVNSISQ TKTDFFTDGR ARRIEFTITL 
TRVDSSLSAM LGDLRQQAEG LIGSAGEMAN RAQSAVGGLF A