Gene PC1_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3197 
Symbol 
ID8134164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3606621 
End bp3607106 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content57% 
IMG OID644866492 
ProductP2 GpU family protein 
Protein accessionYP_003018756 
Protein GI253689566 
COG category[R] General function prediction only 
COG ID[COG3499] Phage protein U 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00170121 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTCA CATTAGGGCT GTTTGTGTTC CAGCTCCAGA CCCTGCCCTA CCAGAACATG 
CAGCGCAACG TTGATTACCG CTGGCCGTCA AACAGTCGCG TTGGTCAGCG TCCGGCGTTG
CAGTTTTTAG GCATTGAGGA AGAGAAAATC ACGCTATCGG GGGAGTTATT GCCGGAAATC
ACAGGCGGCA CGCTGTCATT GTTGATGCTG GAGACGATGG CCGATCAGGG GCGCGCATGG
CCGCTGATTG AGGGCAGCGG CACCATTTAC GGCGTGTTTG TGGTGAACAG TATCAGCCAG
ACGAAAACCG ACTTTTTCAC CGATGGCCGG GCCCGGCGGA TTGAGTTCAC CATCACATTA
ACCCGCGTGG ACTCGTCATT GTCTGCCATG CTGGGCGATT TACGCCAGCA GGCGGAGGGC
TTGATCGGCA GCGCCGGGGA AATGGCTAAC CGGGCGCAAT CCGCTGTCGG GGGTTTATTC
GCATGA
 
Protein sequence
MMLTLGLFVF QLQTLPYQNM QRNVDYRWPS NSRVGQRPAL QFLGIEEEKI TLSGELLPEI 
TGGTLSLLML ETMADQGRAW PLIEGSGTIY GVFVVNSISQ TKTDFFTDGR ARRIEFTITL
TRVDSSLSAM LGDLRQQAEG LIGSAGEMAN RAQSAVGGLF A