Gene PC1_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3187 
Symbol 
ID8134154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3596663 
End bp3597304 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID644866482 
Productphage baseplate assembly protein V 
Protein accessionYP_003018746 
Protein GI253689556 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.701564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAC AAGCCACCCT TACCGAAATC CTGCGTCTCT TGCGCAATAT GATCCGTGTC 
GGCGTCGTGA CCCACGTCAA CACGGCGGAC GCTCTGTGCC GGGTACAAAC CGGAGACATG 
GCCACAGACT GGTTGAACTG GCTGACGCGT CGCGCCGGGC GTTCCCGCGA CTGGTGGGCA 
CCGTCCATCG GTGAGCAGGT GCTGATCCTG TCCATCGGCG GCGAACTGGA CACCGCCTTT 
GTGCTGCCCG GCATCTATTC CGATGATAAC CCCGCGCCGT CAGCCTCTGC CGATGCGTAT 
CACGTCAGCT TTCCCGACGG TGCGATTATC GAGTACGAAC CCGATACCGG AGCGCTGACC 
GTCAACGGGA TTAAAACCGC CACACTCACC GCGTCAGAGT CTATCACCGC CACCGCGCCG 
CAGGTCACCG TAAGTGCCTC CACGCGCATC ACGCTGGACA CGCCCGAAGT GGTCTGCACC 
AACAAGCTGA TCACCGGAAC GCTGGAAGTG CAAAAAGGCG GGGAAATACG CGGCACTATC 
CAGCACAGCG GCAGCGCGTT TACCTCAAAT GGCGTGCAGG TGGATAAACA CAATCACGGC 
AACGTGCAGA ACGGCGGCGG CTGGACGGAC GGGACACGAT GA
 
Protein sequence
MKTQATLTEI LRLLRNMIRV GVVTHVNTAD ALCRVQTGDM ATDWLNWLTR RAGRSRDWWA 
PSIGEQVLIL SIGGELDTAF VLPGIYSDDN PAPSASADAY HVSFPDGAII EYEPDTGALT 
VNGIKTATLT ASESITATAP QVTVSASTRI TLDTPEVVCT NKLITGTLEV QKGGEIRGTI 
QHSGSAFTSN GVQVDKHNHG NVQNGGGWTD GTR