Gene PC1_3151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3151 
Symbol 
ID8134118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3572087 
End bp3573025 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content48% 
IMG OID644866446 
Producthypothetical protein 
Protein accessionYP_003018710 
Protein GI253689520 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGTT CACACAAGCC TCATAACGCG TCTCTGAATA GCAACTCAAG ACTCTTATCA 
CACGCAGATT CATCGCAGGA AAGCCATGAT GAACGAGTCG CGGCGGTAAA GAGCAGAATT
ATCGAATCCG GCGACCATCC CGGTATTTCC GTAGAGGAAC AATTGGCGAT ACTGGACGCC
TTCTCTCACC TTGAATTAGG CCGATTTCTA CTAAAACATC ATGGGCTAAA TGCGTACTGG
ACGCATAATG TGATCACGCA TCAGCCAACT CACTATGTGA ATCCACTCGA AGAAATCATC
TATACACAAC TCCCCAATGT TTTGGCGACA CGCGAACGGT TCAGTATTTT CCAACACCAG
CTTCAAGAAC GCTTACGGCC GAATGCCGTT ATGGTGTCCG TCCCCTGTGG CGTCATGGCT
GACTTATTGC TGCTGAACTA TACGCAACAT CAAGATGTAA AAATCATCGG GATCGACCTG
GATAGACAGG CTCTGGAAGA AGCTTACAAA CTTGCCAGTC AGCAAGGACT GGAAAACCAG
ATATCGTTGG TGCTTGCAGA TGCCTGGGAA ATTGATTTGG CCGCCCAAGC TGATGTGATT
ACCAGCAACG GACTCAATGT TTATGAGCAA GATGATGACA AAGTGACCGA ACTTTACCGC
GTGTTCTATT CTGGGCTGAA ACCGGGAGGC ACGTTGATAA CCAGCTTTAT GACGCCGCCT
CCTACGCAAT CGCAAGACTC TCCGTGGACA AACGCCGAAC CGAAATTGCT GGCGCTTCAA
TATGTCCTTT TCTCACGCAT TATTGGGGCA ACCTGGACAG CGTTCCGTAC CCACAAACAA
ACGCAATCGC AGTTAGAACA GGCTGGATTC ACTGGTATTC AGTTTATTAA CGATCGTATG
CACATGTACC CAACGGTCAT CGCTAGTAAG CCGTATTGA
 
Protein sequence
MSGSHKPHNA SLNSNSRLLS HADSSQESHD ERVAAVKSRI IESGDHPGIS VEEQLAILDA 
FSHLELGRFL LKHHGLNAYW THNVITHQPT HYVNPLEEII YTQLPNVLAT RERFSIFQHQ
LQERLRPNAV MVSVPCGVMA DLLLLNYTQH QDVKIIGIDL DRQALEEAYK LASQQGLENQ
ISLVLADAWE IDLAAQADVI TSNGLNVYEQ DDDKVTELYR VFYSGLKPGG TLITSFMTPP
PTQSQDSPWT NAEPKLLALQ YVLFSRIIGA TWTAFRTHKQ TQSQLEQAGF TGIQFINDRM
HMYPTVIASK PY