Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3151 |
Symbol | |
ID | 8134118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3572087 |
End bp | 3573025 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644866446 |
Product | hypothetical protein |
Protein accession | YP_003018710 |
Protein GI | 253689520 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGGTT CACACAAGCC TCATAACGCG TCTCTGAATA GCAACTCAAG ACTCTTATCA CACGCAGATT CATCGCAGGA AAGCCATGAT GAACGAGTCG CGGCGGTAAA GAGCAGAATT ATCGAATCCG GCGACCATCC CGGTATTTCC GTAGAGGAAC AATTGGCGAT ACTGGACGCC TTCTCTCACC TTGAATTAGG CCGATTTCTA CTAAAACATC ATGGGCTAAA TGCGTACTGG ACGCATAATG TGATCACGCA TCAGCCAACT CACTATGTGA ATCCACTCGA AGAAATCATC TATACACAAC TCCCCAATGT TTTGGCGACA CGCGAACGGT TCAGTATTTT CCAACACCAG CTTCAAGAAC GCTTACGGCC GAATGCCGTT ATGGTGTCCG TCCCCTGTGG CGTCATGGCT GACTTATTGC TGCTGAACTA TACGCAACAT CAAGATGTAA AAATCATCGG GATCGACCTG GATAGACAGG CTCTGGAAGA AGCTTACAAA CTTGCCAGTC AGCAAGGACT GGAAAACCAG ATATCGTTGG TGCTTGCAGA TGCCTGGGAA ATTGATTTGG CCGCCCAAGC TGATGTGATT ACCAGCAACG GACTCAATGT TTATGAGCAA GATGATGACA AAGTGACCGA ACTTTACCGC GTGTTCTATT CTGGGCTGAA ACCGGGAGGC ACGTTGATAA CCAGCTTTAT GACGCCGCCT CCTACGCAAT CGCAAGACTC TCCGTGGACA AACGCCGAAC CGAAATTGCT GGCGCTTCAA TATGTCCTTT TCTCACGCAT TATTGGGGCA ACCTGGACAG CGTTCCGTAC CCACAAACAA ACGCAATCGC AGTTAGAACA GGCTGGATTC ACTGGTATTC AGTTTATTAA CGATCGTATG CACATGTACC CAACGGTCAT CGCTAGTAAG CCGTATTGA
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Protein sequence | MSGSHKPHNA SLNSNSRLLS HADSSQESHD ERVAAVKSRI IESGDHPGIS VEEQLAILDA FSHLELGRFL LKHHGLNAYW THNVITHQPT HYVNPLEEII YTQLPNVLAT RERFSIFQHQ LQERLRPNAV MVSVPCGVMA DLLLLNYTQH QDVKIIGIDL DRQALEEAYK LASQQGLENQ ISLVLADAWE IDLAAQADVI TSNGLNVYEQ DDDKVTELYR VFYSGLKPGG TLITSFMTPP PTQSQDSPWT NAEPKLLALQ YVLFSRIIGA TWTAFRTHKQ TQSQLEQAGF TGIQFINDRM HMYPTVIASK PY
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