| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3133 |
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| Symbol | |
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| ID | 8134094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3546101 |
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| End bp | 3548266 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866422 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_003018692 |
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| Protein GI | 253689502 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAACAA CAGACCACGT GAGTGCAAAG GCAACCAAGG CCGACTCAGA TGCCCACTCA
CTCGATTACC ACGCGCTGAA CGCGATGCTT AACCTCTACG ACGCAGAGGG GAATATCCAG
TTCGAGATGG ATAAGCTCGC GGCGCGCCGT TATTTCCTAC AGCATGTAAA CCAGAACACC
GTGTTCTTCC ACAATTTGGA AGAAAAGCTG CGTTATCTGG TGGAAGAAGG CTACTACGAA
GCGGAAGTAC TGGATCAATA TCAGTTCGAT TTCATCAAGC GTCTTTTCCA GCAGGCTTAC
GCTCACAAGT TCCGCTTTCA AACCTTTCTA GGTGCGTTCA AATACTACAC CGGCTATACG
CTAAAAACCT TTGACGGCAA GCGCTATCTG GAGCGCTACG AAGATCGCGT CTGCCTTGTG
GCGCTAACCC TCGCCAAAGG GGACACCGCA CTGGCTGGCG CGCTGGTCGA TGAGATCATC
AGCGGGCGCT TCCAGCCCGC CACCCCCACG TTCCTCAACT GCGGTAAAAA GCAGCGCGGC
GAGCTGGTCT CCTGCTTCCT GCTGCGTATT GAAGACAATA TGGAGTCGAT TGGTCGAGCC
ATTAACTCCG CGCTTCAGCT CTCAAAACGC GGCGGCGGCG TGGCATTCAT GCTCAGCAAC
ATCCGCGAAA CCGGTGCGCC AATCAAACGT ATCGAAAACC AGTCATCTGG CATTATTCCG
ATCATGAAAA TGCTCGAAGA CGCGTTCTCC TACGCCAACC AGCTTGGTGC TCGTCAGGGG
GCTGGCGCAG TGTACCTCAA TGCGCATCAC CCGGATATTC TGCGTTTTCT GGATACCAAG
CGGGAAAATG CCGATGAGAA AATTCGTATC AAAACACTGT CTTTGGGTGT GGTCATTCCC
GATATCACGT TCCAGTTGGC GAAGAATAAT CAGGTGATGT ACCTGTTCTC GCCTTATGAC
GTCGAGCAGG TTTATAGCGT ACCGCTATCA GAAATTAGCG TCACCGAAAA ATACCACGAG
ATGGTAAACG ATAAGCGCAT CCGTAAATCC CAAATCAAGG CGCGCGAATT CTTCCAGATC
CTCGCCGAAA TCCAGTTTGA GTCCGGTTAT CCCTACATGA TGTTTGAGGA TACGGTGAAT
CGCGCAAATC CGATTCACGG CCGCATCAAT ATGAGCAACC TGTGCTCTGA GATTTTGCAG
GTCAACGACG CCAGCCTGTA CGATGACGAT CTCGGCTATC GCCACATTGG CAAGGACATC
TCCTGTAACC TCGGTTCGAT GAATATTGCC AACGCGATGG CTTCGCCCGA TTTCGGCCAG
ACGGTTGAAA TGGCGATCCG CGCACTGACC GCCGTTTCCG ATATGAGCCA TATCCGCTCC
GTGCCATCCA TCGAAAAAGG CAACGACGAA TCCCATGCGA TTGGTTTAGG TCAGATGAAC
CTGCACGGCT ATCTGGCGAA AGAGCGTATT TTTTACGGCA CAGAAGAAGC CGTCGATTTC
ACCAATATCT ATTTCTATAC CGTCGCTTTC CACGCGATTC GGGCATCGAA TGCGTTAGCC
ATAGAACGGA ACCAGCGCTT CTCAGGCTTC GAGCACTCCA AATACGCCAC AGGCGAGTAT
TTTGATAAAT ACATTGAACA GTGCTGGGAG CCCACAACCG CGCGCGCCCG TGAACTGTTT
GAACAAGCCG ATATCCACAT TCCTACTCAG CAGGACTGGG CGGCGTTACG CGAATCTGTT
ATTGCTCACG GCATTTATAA CCAGAACTTG CAGGCTGTTC CACCGACCGG TTCGATTTCG
TATATCAACC ACTCGACGTC CAGTATCCAC CCGATTGTGT CACGCATCGA AATTCGTAAA
GAGGGCAAGA TCGGCCGCGT CTACTACCCC GCTCCTTACA TGAACAATGA CAATCTCGAG
TATTACCAGG ATGCCTATGA GATTGGGCCG CAGAAGATCA TCGACACCTA TGCCGCCGCT
ACGCAGCACG TCGATCAGGG GCTGTCGCTG ACGCTGTTTT TCCGTGATAC CGCCACCACG
CGAGACATCA ATAAAGCGCA GATCTACGCC TGGACAAAAG GTATTAAGAC TATTTATTAC
ATTCGCATAC GGCAAATGGC GCTGGAAGGC ACCGAAGTTC AGGGCTGTGT GTCCTGTGCG
CTATAA
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| Protein sequence | MATTDHVSAK ATKADSDAHS LDYHALNAML NLYDAEGNIQ FEMDKLAARR YFLQHVNQNT
VFFHNLEEKL RYLVEEGYYE AEVLDQYQFD FIKRLFQQAY AHKFRFQTFL GAFKYYTGYT
LKTFDGKRYL ERYEDRVCLV ALTLAKGDTA LAGALVDEII SGRFQPATPT FLNCGKKQRG
ELVSCFLLRI EDNMESIGRA INSALQLSKR GGGVAFMLSN IRETGAPIKR IENQSSGIIP
IMKMLEDAFS YANQLGARQG AGAVYLNAHH PDILRFLDTK RENADEKIRI KTLSLGVVIP
DITFQLAKNN QVMYLFSPYD VEQVYSVPLS EISVTEKYHE MVNDKRIRKS QIKAREFFQI
LAEIQFESGY PYMMFEDTVN RANPIHGRIN MSNLCSEILQ VNDASLYDDD LGYRHIGKDI
SCNLGSMNIA NAMASPDFGQ TVEMAIRALT AVSDMSHIRS VPSIEKGNDE SHAIGLGQMN
LHGYLAKERI FYGTEEAVDF TNIYFYTVAF HAIRASNALA IERNQRFSGF EHSKYATGEY
FDKYIEQCWE PTTARARELF EQADIHIPTQ QDWAALRESV IAHGIYNQNL QAVPPTGSIS
YINHSTSSIH PIVSRIEIRK EGKIGRVYYP APYMNNDNLE YYQDAYEIGP QKIIDTYAAA
TQHVDQGLSL TLFFRDTATT RDINKAQIYA WTKGIKTIYY IRIRQMALEG TEVQGCVSCA
L
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