| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3041 |
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| Symbol | |
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| ID | 8133996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3426308 |
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| End bp | 3427381 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866324 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_003018600 |
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| Protein GI | 253689410 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.167253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTGA ATCTCGGCTC GCTACCGCGC CAGCGCCCGT TGTTGAATCG ACTGCGCGAT
CTGTGGCCGC TGTGGCTCTT TTTGGCGCTG CTGGCCTCGG CGCTGCATTA CATCGTGGGG
TACTGGCCGC AAATCCTGTT GCAAAGCGCG ATCTGGCAGA AATCGCTGCA TCAGCAAATG
TCGCACCTGT TGCAAATGGT GGAACAGCAG CCGCATCAGG CGGGGTTGAG TCTGATGATA
TTTAGTCTGG TCTATGGTGT GCTCCACGCC GTTGGGCCAG GGCACGGTAA AGTGGTCATC
ATGACCTATC TGGCGACGCA CCCGTCGAAG CTGAAAAGCA GCCTGAAGTT GACGTTTGCC
GCGTCGCTGG TTCAGGGACT GATGGCGGTA GCGCTAGTGA CCGTGGTTTT AGGGATCTTA
CAGTTATCCA GCCGAACGTT GCACAACAGC AGTTTCTGGA TGGAAAAAGG AAGCTTCGTG
CTGGTCGCGG GGTTGGGGCT CTTGCTCTGT TTCCGCGCAT TGAAACAGCT GTACACCGCC
CTCGTACAGC AGCCTAAACC TGCGACTATT TTGCGTGTCA CCCAGCTTAA CGTACCAACG
GATAGACGTA TGAGGCTTCG CCCGGCGCCT GTGCTTTCCC ATTCTTTGCA TCAGCACGAT
GCCAACTGCG GCTGTGGGCA CCGCCACCTT CCCAGCAATG AGGAGCTTGA GCGTGATAGC
AGCTGGCGTA CGCGCTTGAT GATTGTGCTG GCGATGGGAA TGCGCCCCTG TTCAGGCGCT
ATTCTGGTGC TGCTTTTCTC TAAAGTGATC GACGTCTATC TGTGGGGCGT CGCCTCTGCG
CTGGTGATGG CGGCCGGAAC GGCGATCACG ATCTCGGCGC TGGCCGTGTT GGTTTTTTAC
TGCCGTCGCA TCGTTGAGCG TTTAGGGGCT AATCGAGCAT CGCCCGTATG GCAGCGAGCG
ACGTTTTCTC TTCTGGCTTT TGCTGGCGGG CTGATTTTGG TTGGCTCCGG CATCCTGCTT
TACCTCAGCG CACAGCCCGC GATGATGGGC GGTATTCGGC CATTCTCCGG CTAA
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| Protein sequence | MSVNLGSLPR QRPLLNRLRD LWPLWLFLAL LASALHYIVG YWPQILLQSA IWQKSLHQQM
SHLLQMVEQQ PHQAGLSLMI FSLVYGVLHA VGPGHGKVVI MTYLATHPSK LKSSLKLTFA
ASLVQGLMAV ALVTVVLGIL QLSSRTLHNS SFWMEKGSFV LVAGLGLLLC FRALKQLYTA
LVQQPKPATI LRVTQLNVPT DRRMRLRPAP VLSHSLHQHD ANCGCGHRHL PSNEELERDS
SWRTRLMIVL AMGMRPCSGA ILVLLFSKVI DVYLWGVASA LVMAAGTAIT ISALAVLVFY
CRRIVERLGA NRASPVWQRA TFSLLAFAGG LILVGSGILL YLSAQPAMMG GIRPFSG
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