| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3016 |
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| Symbol | |
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| ID | 8133971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3401260 |
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| End bp | 3402039 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866299 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_003018575 |
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| Protein GI | 253689385 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGTGT CTCTATCACG GAGAATAGCG GTATTACAGG GAGTGTACTG GCTGAGTGGT
CTGCTCGCGG TGCTGTTGCT GACGGGGTGT GTGTATTCGC CTCAGGATGC GACAAAGCCA
GCGATCGCTC AAACCCGTTT GCAGTTGGGG CTAGCGTATC TGGCGCACAA TAATCTGGAT
TCAGCTCGGC AGAATCTTGA AAAGGCGGTG GCGATGGCTC CGCTGGATTA CCGAACACAA
TTGGGGATGG CGCTCTACGA GCAGCGGATA GGTGAAAACC GTCTTGCCGA ACAGCGCTAT
CAGCATGTGT TGAACATGGC GCCGGAAAAT GGCAGCGTCA TGAATAATTA CGGTGCGTTT
CTGTGTAGTT TAGGGCAGTA TGTAGCGGCG CAGCAACAGT TTAGTGCGGC TGCACAACTT
CCTGATTACA GTCAGGTTGC TGATGCGTTG GAAAATGCGG GATACTGCTT TTTCAATGCC
GGGCAGAGTG AAAATGCGCG CAATTTATTA AGCCGGGCGC TGAGATATGA CCCGACGAAA
GGCAGTGCCT TGCTGGCGGA AGCAAACAAA CAGTTTGATG CCGGGAAAAA TGAGCAAGCG
CGGCTGCTGC TTGATGTTTA TCAGCATAGT CTTCCGGCCA GTGCCGAAAG CTTATGGTTA
CAGATTCGTT TCGCCGCGTT GGCGGGCCAT GATGGCGATA AAGAACGTTA TGGCAACGTG
CTGGCGCGAA GTTTTCCACA ATCTAAACAG TACCAGCATT TCTTAGCTAA TGAATACTGA
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| Protein sequence | MVVSLSRRIA VLQGVYWLSG LLAVLLLTGC VYSPQDATKP AIAQTRLQLG LAYLAHNNLD
SARQNLEKAV AMAPLDYRTQ LGMALYEQRI GENRLAEQRY QHVLNMAPEN GSVMNNYGAF
LCSLGQYVAA QQQFSAAAQL PDYSQVADAL ENAGYCFFNA GQSENARNLL SRALRYDPTK
GSALLAEANK QFDAGKNEQA RLLLDVYQHS LPASAESLWL QIRFAALAGH DGDKERYGNV
LARSFPQSKQ YQHFLANEY
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