Gene PC1_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3012 
Symbol 
ID8133967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3397058 
End bp3397678 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content53% 
IMG OID644866295 
Producthypothetical protein 
Protein accessionYP_003018571 
Protein GI253689381 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAGTCT ATACCACAGA GAATGAACAG GTTGATGCAC TACGTCGTTT CCTCGCGGAG 
AACGGAAAGG CGTTAGTGGT CGGTGTTGTG CTGGGTGTTG GCGCACTGGT TGGCTGGCGT 
TTCTGGCAAA ATCACCAAAA TGATAGCGTG ATGGCAGCGT CCGCATCCTA TCAGCAGGTG 
ACGGAGCAAC TGGCTGAAGG CAAAACCGAC GCGATTGCGG CAACAGAGAA ATTTACGGCT 
GAGAATAAAA ACGCCTATGG CGCGCTGGCT TCTCTGGAAT TGGCTCGTCA TTACGTTGAT 
CTGAAAGATT TTGCAAAAGC AGAACAGCAA TTGGTACAGG CGCTGTCGCA GACGAAAGAT 
GCCGACCTGC TGGCGGTGGT GAACCTGCGT TTGGCGCGAG TGCAGTTACA GGAAAACAAA 
GCGGATGACG CGCTGAAAAC GCTGGATGCC ATCAAGCTAG AAGGCTGGGC GTCACAGGCT 
GCGGAAGTTC GTGGCGATAT TCTGGCGAGC AAAGGGGATA ATCAGGCTGC GCGTGATGCC 
TACAACAAAG GGTTGTCTTC CAATCCATCG CAGGCACAGC AAGCGTTACT GCGCATGAAA 
CTGAATAACC TGTCCAGCTA A
 
Protein sequence
MEVYTTENEQ VDALRRFLAE NGKALVVGVV LGVGALVGWR FWQNHQNDSV MAASASYQQV 
TEQLAEGKTD AIAATEKFTA ENKNAYGALA SLELARHYVD LKDFAKAEQQ LVQALSQTKD 
ADLLAVVNLR LARVQLQENK ADDALKTLDA IKLEGWASQA AEVRGDILAS KGDNQAARDA 
YNKGLSSNPS QAQQALLRMK LNNLSS