| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2972 |
|---|
| Symbol | |
|---|
| ID | 8133927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 3358789 |
|---|
| End bp | 3359517 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644866255 |
|---|
| Product | DNA-binding transcriptional regulator BaeR |
|---|
| Protein accession | YP_003018531 |
|---|
| Protein GI | 253689341 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG CACCCGATTT CGCTATGGCG TCACCCATTC TGATCGTCGA AGATGAACCC
AAATTGGGGC AACTGTTGGT GGATTATCTT CAGGCAGCGG ACTATGCCAC GCACTGGCTG
CCCAACGGCA ACGATGTCGT CGACTGGGTG CGGCAGCATT CCCCCTCACT CATTTTGCTG
GACTTAATGC TACCGGGCTG TGACGGCCTG ACGCTTTGCC GCACGATCCG TCAGTTTTCC
AACGTGCCGA TTATCATGGT CACCGCCCGC AGCGAAGAGA TCGATCGCCT GCTGGGGCTG
GAAATTGGCG CTGATGACTA CATTTGTAAA CCCTTTAGCC CGCGCGAAGT GGTGGTGCGC
GTCAGAACGC TGCTGCGCCG CTGCGGCTGG CAGAACGACG GCGTGAAAGC CATCGAGAAA
ACCGAAACCG CGCTAGTGAT TGATAAAGGC GGCTTTCAGG CCAGCTATCT GGGGCAGAAC
CTCGATCTCA CGCCAGCAGA GTTTCGTCTG CTCAAGACGC TTTCCACCGA GCCGGGCAAA
GTGTTTTCCC GCGAGGCGCT GCTGGATAAG CTCTACGATG ACTATCGCGT TGTGACCGAC
CGCACCATCG ATAGCCACAT CAAAAACCTG CGTCGTAAGC TGGAACAGCT GGACGAAGAG
ACCTCATTCA TCCGCACGGT ATACGGCATC GGCTATCGCT GGGAAGCCGC GCCCTGCAAT
GAGGTATAA
|
|---|
| Protein sequence | MTTAPDFAMA SPILIVEDEP KLGQLLVDYL QAADYATHWL PNGNDVVDWV RQHSPSLILL
DLMLPGCDGL TLCRTIRQFS NVPIIMVTAR SEEIDRLLGL EIGADDYICK PFSPREVVVR
VRTLLRRCGW QNDGVKAIEK TETALVIDKG GFQASYLGQN LDLTPAEFRL LKTLSTEPGK
VFSREALLDK LYDDYRVVTD RTIDSHIKNL RRKLEQLDEE TSFIRTVYGI GYRWEAAPCN
EV
|
|---|
| |