| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2825 |
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| Symbol | |
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| ID | 8133778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3199624 |
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| End bp | 3201207 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866113 |
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| Product | malate:quinone oxidoreductase |
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| Protein accession | YP_003018391 |
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| Protein GI | 253689201 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | [TIGR01320] malate:quinone-oxidoreductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0832763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TACTTGCTAT GTTCTTCTGC CTGACCGTGG TGGTTAACGC CCCACTGGCG
ATGGCTGAAG ATGCTAAAAC GACAGAGAAG ACAACGGATG TGGTACTGAT CGGCGGGGGT
ATTATGAGCT CTACGCTGGG TGTGTATTTA CAGGAGCTGC AACCGGACTG GTCTATCGAT
ATGGTTGAGC GTATGGATAA CGTGGCGGAA GAGAGCTCTA ACGGCTGGAA TAATGCCGGT
ACGGGTCACT CGGCCTTCAT GGAACTCAAC TATACGCCGG ATAATCCAGA CGGCCCGATC
AATATTAGTA AAGCGCTGGA AATTACTGAG GCCTTTGAAG TCTCGCGCCA GTTTTGGTCC
TATCAGGTGA AAAACGGCGT GCTGAATAAT CCGCACTCTT TCATCAATAG CGTGCCGCAC
ATCAGCTTTG TCTGGGGCGA CGAGAACACC GCCTTCCTGA AACACCGCTA TGATGCGATG
CAGCACAGCA CGCTGTACCG TGGCATGGAG TTCTCTGACG ATCCTAATAC GATCAAAGAG
TGGGCGCCGC TGGTGATGGA AGGGCGCGAT CCGGCGCAGA AGATTGCGGC GACTCGCATG
CCTATTGGTA CCGACGTGAA CTACGGTGAA ATCACTCGTC AACTGGTTGA CGCGATGAAA
ACCAAGTCCA ACTTTGCGCT GCATCTGAAT TCAGAAGTTC GTGATATCAA GCGTAATGCG
GACAACACCT GGAGCGTGAC TTACGCCGAT CTGAAGAACG GTGAGAAAGA GAGCGTGATT
AAGGCGAAGT TCGTCTTTAT CGGTGCGGGT GGGGCGGCAC TGCAACTGTT GCAGAAAACC
GGTATTCCTG AGGCCGATCT GTACGGCGGC TTCCCGGTTG GCGGTGAATT CCTGGTGACA
GAAAACCCGG AAATCGTGAA GCGTCACATG GCAAAAGTGT ACGGTAAAGC CTCCGTGGGC
GCGCCGCCGA TGTCCGTTCC TCATCTGGAT ACGCGTATTT TTGACGGCAA GCCAGTCCTG
CTGTTTGGGC CATTTGCTAC TTTCTCCAGC AAGTTCCTGA AAAACGGTTC GCTGTGGGAT
CTGATCGGTT CCGTGACTTT CTCCAACGTG ATGCCGATGA CGCACGTCGG TCTGGATAAC
TTCGATTTGG TGAAATATCT GATCGGTCAG GTCATGATGG ATGACGACGA TCGCTTCGCG
TCATTGAAGG AATACTTCCC GAATGCGAAG AAAGAAGACT GGAGACTGAC GGTTGCTGGC
CAGCGCGTGC AGATTATCAA GAAAGATGAT GATAAAGGCG GCGTACTGAA GCTGGGTACT
GAGATTGTCA GCTCTCAGGA TGGCTCGATT GCTGCGCTGT TGGGTGCCTC TCCAGGTGCT
TCTACCGCCG CGCCGATTAT GCTGAGCCTG CTGGAAAAAG TGTTTAAAGA TAAAGTCGCG
ACACCAGAAT GGCAGAGCAA GCTGAAAGAG ATTGTTCCGT CTTATGGTCA GAAGCTTGAC
GGCAATATTG AAATGACCAA TAAAATCCGC AGCTACACCA GCAGCACGCT GGGTCTGGAT
TATATTGAGG TTAAACCTGA GTAA
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| Protein sequence | MKKLLAMFFC LTVVVNAPLA MAEDAKTTEK TTDVVLIGGG IMSSTLGVYL QELQPDWSID
MVERMDNVAE ESSNGWNNAG TGHSAFMELN YTPDNPDGPI NISKALEITE AFEVSRQFWS
YQVKNGVLNN PHSFINSVPH ISFVWGDENT AFLKHRYDAM QHSTLYRGME FSDDPNTIKE
WAPLVMEGRD PAQKIAATRM PIGTDVNYGE ITRQLVDAMK TKSNFALHLN SEVRDIKRNA
DNTWSVTYAD LKNGEKESVI KAKFVFIGAG GAALQLLQKT GIPEADLYGG FPVGGEFLVT
ENPEIVKRHM AKVYGKASVG APPMSVPHLD TRIFDGKPVL LFGPFATFSS KFLKNGSLWD
LIGSVTFSNV MPMTHVGLDN FDLVKYLIGQ VMMDDDDRFA SLKEYFPNAK KEDWRLTVAG
QRVQIIKKDD DKGGVLKLGT EIVSSQDGSI AALLGASPGA STAAPIMLSL LEKVFKDKVA
TPEWQSKLKE IVPSYGQKLD GNIEMTNKIR SYTSSTLGLD YIEVKPE
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