| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2792 |
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| Symbol | |
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| ID | 8133745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3164755 |
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| End bp | 3165327 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866080 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_003018358 |
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| Protein GI | 253689168 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.863325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCGAC TGATTATAGG GATTTCCGGC GCGAGCGGCG TCATTTACGG CGTCCGGCTG
CTACAGATTT TACAGGCGCT GGAAGGTATC GAAACACACC TGATCATGAG TCAGGCCGCC
CGACAGACGC TGGCGTTAGA AACCGATTTT AGCCTGCGTG ATGTACAGGC ACTGGCCGAT
GTGGTGCATG ACACGCGTGA TATCGCGGCC AGCGTCTCTT CGGGATCGTT TAAAACGGCG
GGGATGGTGA TTTTACCTTG TTCAATAAAA ACCCTGTCTG GCATTGTGCA CAGTTACAGC
GATAACTTAT TAACGCGCGC GGCCGATGTG GTGCTGAAGG AGCGTCGTCC TTTGGTGCTG
GGAGTTCGTG AAACGCCGCT GCATTTAGGA CATTTACGGC TGATGACCAC CGCCGTTGAA
CTCGGGGCGA TAATCATGCC GCCTGTGCCT GCGTTCTATC ATCGCCCAGA AAGTGTGCAG
GATATTGTCG ATCAGACGGT GAACCGCATT CTGGACCAGT TTGATATCGA CCTGCCGAAA
GATCTCTTTA CCCGTTGGCA AGGTGCGTCA TAG
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| Protein sequence | MKRLIIGISG ASGVIYGVRL LQILQALEGI ETHLIMSQAA RQTLALETDF SLRDVQALAD
VVHDTRDIAA SVSSGSFKTA GMVILPCSIK TLSGIVHSYS DNLLTRAADV VLKERRPLVL
GVRETPLHLG HLRLMTTAVE LGAIIMPPVP AFYHRPESVQ DIVDQTVNRI LDQFDIDLPK
DLFTRWQGAS
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