| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2771 |
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| Symbol | |
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| ID | 8133724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3144543 |
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| End bp | 3145217 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866059 |
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| Product | NADH dehydrogenase subunit B |
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| Protein accession | YP_003018337 |
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| Protein GI | 253689147 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.320877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACTATA CGCTCACCCG CATAGAGCCG GACGGTGAGA ATGACCGTTA TCCCCTGCAA
CGTCAGGAGA TCGTTTCCGA CCCTCTGGAG CAACATGTTC ACCGCAGTGT CTACATGGGC
AAACTGGAAC ATGCGTTACA CGATACGGTG AACTGGGGGC GTCAGAACTC CCTGTGGCCG
TACAACTTCG GCCTTTCCTG TTGCTACGTA GAAATGGTGA CGTCATTTAC GGCGGTTCAT
GACGTGGCGC GTTTTGGTGC TGAGGTTCTG CGTGCATCGC CACGTCAGGC TGACTTCATG
GTCGTAGCGG GAACCTGTTT TACCAAAATG GCCCCCGTTA TTCAGCGTCT GTACGAGCAA
ATGCTTGAGC CTAAATGGGT TATCTCCATG GGCGCCTGTG CTAACTCCGG TGGTATGTAC
GATATCTATT CCGTCGTTCA GGGCGTAGAT AAATTCCTGC CTGTTGATGT GTATATTCCA
GGCTGCCCTC CGCGTCCTGA AGCCTACATG CAAGCGCTGT TGCTGCTGAA AGAATCCATC
GGTAAAGAAC GCCGCCCTCT GTCATGGGTG GTAGGTGAAC AGGGCGTTTA CCGTGCCAAT
ATGCAATCTG AGCGTGAACG CAAACGCGGC GAGCGAATCG CTGTGACCAA CCTGCGCTCG
CCTGATGAGA TTTGA
|
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| Protein sequence | MDYTLTRIEP DGENDRYPLQ RQEIVSDPLE QHVHRSVYMG KLEHALHDTV NWGRQNSLWP
YNFGLSCCYV EMVTSFTAVH DVARFGAEVL RASPRQADFM VVAGTCFTKM APVIQRLYEQ
MLEPKWVISM GACANSGGMY DIYSVVQGVD KFLPVDVYIP GCPPRPEAYM QALLLLKESI
GKERRPLSWV VGEQGVYRAN MQSERERKRG ERIAVTNLRS PDEI
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