Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2743 |
Symbol | |
ID | 8133696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3109574 |
End bp | 3110503 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644866031 |
Product | formate dehydrogenase accessory protein FdhE |
Protein accession | YP_003018309 |
Protein GI | 253689119 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3058] Uncharacterized protein involved in formate dehydrogenase formation |
TIGRFAM ID | [TIGR01562] formate dehydrogenase accessory protein FdhE |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTC GCATTGTTCC TCAGGAACAG TTAGAACAGA ATGGAAAATC GACGCCGGAA GGGCATATCC CTCCACTGCT TTTTGCCAAC CTAAAAAGCC TGTACAGCAG CCGCGCGGAG CGTCTGCGCC AGTTAGCTGC TGATCACCCG CTGGGGGATT ATCTCACCTT TGCCGCAGGC GTGGTGGAAG CACAACAAAA GGTGCTGCAC GATCATCCGT TGCAGCTTGA TCTGAGTAAC GTGCTGACTC AGTCTGGTGA ACGCCCACCG CTCGATATCG CGGTATTCCC ACGCGATAGG CACTGGCTCA CGCTGCTGCG CGCACTGATT GAAGAATTAA AACCGGATGC CAGCGGGCAG GTATTATCCA CGCTGGAGAA TCTGGAAAAA GCCTCGGAGC AGGAGCTGGA AGAGCAGGCA ACGGCGCTGC TGCAACATGA GTTTCATGCT GAAAACAACG ATAAAGCCCC GTTCATCTGG GCGGCGCTGT CGCTGTTCTG GGCACAGATG GCAAGTCTGC TGCCCGGTAA AGCGCGCGCA GTACCCGGCG AACATCGTCA GTTCTGCCCG GTGTGCGGCA GTATTCCGGT ATCGGGCGTG GTGCAGTTAG GTACGTCCAG CGGCTTGCGT TATCTGCACT GCAATCTGTG CGAGAGTGAA TGGCACATGG TGCGGGTGAA ATGCAGCAAC TGTGAAGAGT CGAGCGATCT CAATTACTGG TCGCTGGATA GCGAAAATTC CGCAATCAAA GCAGAAAGCT GTGGTCACTG CGGCACGTAT CTGAAGCTGC TATATCAGGA GAAAGATCAC CGTGTGGAAG CCGTCGCCGA CGATCTGGCT TCGCTGGTGC TGGATGTGAA AATGGAGGAA GAAGGCTTTT CTCGCAGTAG CATCAACCCC TTCCTGTTCC CGGAAAGTTC GATCGAATAA
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Protein sequence | MSIRIVPQEQ LEQNGKSTPE GHIPPLLFAN LKSLYSSRAE RLRQLAADHP LGDYLTFAAG VVEAQQKVLH DHPLQLDLSN VLTQSGERPP LDIAVFPRDR HWLTLLRALI EELKPDASGQ VLSTLENLEK ASEQELEEQA TALLQHEFHA ENNDKAPFIW AALSLFWAQM ASLLPGKARA VPGEHRQFCP VCGSIPVSGV VQLGTSSGLR YLHCNLCESE WHMVRVKCSN CEESSDLNYW SLDSENSAIK AESCGHCGTY LKLLYQEKDH RVEAVADDLA SLVLDVKMEE EGFSRSSINP FLFPESSIE
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