Gene PC1_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2719 
Symbol 
ID8133672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3080490 
End bp3081518 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content57% 
IMG OID644866007 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_003018285 
Protein GI253689095 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG TATTTACCGC CGAATACGGC GGCAGCCTTG ATGCCTTTAA GGCACTGGGG 
GAATTGGTGG TAGACGGCTG GGCCATCGGT CAGCCCAAAC TGAGCGAAGC GGCGCTGATT 
CGACTGGCGG AGAACGCCGA CGTCATCGTT ACCAGCTATG ATGATATTAC CGCCCACGTC 
ATTGAGGCGT GTCCTCACCT ACGGATTATC GCCTGTACCC GCGCCAACCC GGTCAACATC 
GATATCGAGG CCGCACGCCG CCGAGGTATT CCGGTGCTTT ACACGCCCGG ACGCAATGCC 
GATGCTGCAG CAGAATTAAC GCTGGCGCTG ATGTTGAATG CCACCCGCCA CATCCCTCAG 
GCCCATAGCG CGCTAAAGCG CGGCGAATTC ACGCGCGAAA CCCACACAGT GACACAGACG 
CAGGACGGGT TACGGCAGGA TGTGGTGTGG GACGTAGACA AAGACAGCCC GTATGAAGTT 
TTCAAAGGCG GCGAACTGCG TAATAAGACA CTCGGCATCA TCGGCTATGG CAGCATTGGT 
CATCGTGTCG GGAAGCTGGC GCGTGCCTTC GGTATGCAAT TGCTGATAGC GGATCCGTAT 
GTCGCCGCCG AAGAGATCGA CGAACCGGGC ATGCGAAAAA CCACGCTGGA CGAGCTGTTT 
TCACAGTCCG ATTTCGTCAG CCTGCATCTG AACAGCACGT CGCAGACTAA AGGGTTGGTC 
AACCTCGATA GGCTCAGAAC CATGCGTCCC AGCGCCTATC TGATCAACAC CTCGCGTGCT 
GCCGTTGTTG TCGAAGCCGA TCTGATCGTA GCGCTACGCG AAAAGTGGCT GGCGGGTGCC 
GCACTTGATG TTTACGACAG CGAACCGCTC TGGCGTCATC ACCCGTTTAT TACCGAATTT 
GATAATGTGG TACTCACGCC ACACATTGCC GGCGCGACGC GGGAGACGCT GATCAAGCAC 
ACTGCGATGA TCGCCGCCGA CCTGCAGCGG TTTATTCGCG GCGAACCGCT GCTTTACGAA 
TGGAAATAG
 
Protein sequence
MKIVFTAEYG GSLDAFKALG ELVVDGWAIG QPKLSEAALI RLAENADVIV TSYDDITAHV 
IEACPHLRII ACTRANPVNI DIEAARRRGI PVLYTPGRNA DAAAELTLAL MLNATRHIPQ 
AHSALKRGEF TRETHTVTQT QDGLRQDVVW DVDKDSPYEV FKGGELRNKT LGIIGYGSIG 
HRVGKLARAF GMQLLIADPY VAAEEIDEPG MRKTTLDELF SQSDFVSLHL NSTSQTKGLV 
NLDRLRTMRP SAYLINTSRA AVVVEADLIV ALREKWLAGA ALDVYDSEPL WRHHPFITEF 
DNVVLTPHIA GATRETLIKH TAMIAADLQR FIRGEPLLYE WK