Gene PC1_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2704 
Symbol 
ID8133657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3067839 
End bp3068954 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content54% 
IMG OID644865992 
Productbeta-lactamase 
Protein accessionYP_003018270 
Protein GI253689080 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGGC AATATGTGCG CAGTCGTGCG CGATTGTTAG CTGCAGGCAC GGTTTTTATG 
TCGCTGATTA CCGCGGGAAT CTACCTGCAA CCGGGTTTTA GTACACCTTC TCTGCACCAG 
GAGGGAGATG CAACGGTGGT ATCGTTTTTA ACGCCATTAC TGAGAGGATC ACGGAGCAGC 
GTTGCCGCCG CATTTATCAC CCCGCGAGGC GTACAGTACG CTCTGTGGAA CAGTGATTAT 
GCAAAACAGT ATGAGATCGC CAGTCTCACC AAAACCATGA CCAGCAGTCT GCTGATTGAG 
GCGCAGCAGC GTGGCGAAAC TACCGCGCAA ACCCGTGTAG GAGAACTCGT CCCGGAAATC 
ACTGGTCCAG CGAGCGACAT TACACTTGCA CAACTGGCGT CACATCGCTC CGGCCTGCCA 
CCACTAGCGA CATCATTACG ACAGAAAATT CAGGTACTCA AGGCAATTAT CCTGCGTGAC 
AATTTTTGGG ATTACGATGA AGAGACATTA ATAGATATGG TGAATAATAC CAGCGTCAAA 
AGGCCCGCCG GGTTTGATTA CTCCAATACT GGTTACGCTC TGCTGGGACT GGCGTTGGCG 
CGAGCATCAC ATCAACCTTT TGCCACTTTG CTGCAAACAC GGATTTTTGC GCAGGCGCAA 
ATGACAGAAT CCGTCGTCGC CAGTGATTCG ACACGTGACA CGCCCGCATT CAGCCACGGT 
TGGTCAGCTT CCGGACTCAG CGAAGCGCCG TGGGTATTGC ACGCATTTAC CCCTGCCGCA 
GGTGTGCGAT CGACCATTGT CGATATGGCA AATTATGCTC AGGTGTTACT GGCAGGAAAA 
CTCGCAGGGA GCGAAGCGAT GTCGCCGCAA TTTGCCACCG ACGATCCCGA TTCACGCGTT 
GGCTATGCCT GGTTTACCAC CCGCATACAG GGGCGAGATA TCACCTGGCA TGACGGAGAA 
TCCTCGGGGT TCGCGACCGC TATCGCCTTC GATCTGCAGC GTAAAAGCGC CGTTGTGATC 
CTCTCTGACA CCGCATGGCC GGTGATTGGC CCGGCAATAC GGTTGTTGCT AACCCAGCCA 
TCTTCTGAAA CAGAGGCACA CCGTGAACTG GATTGA
 
Protein sequence
MNRQYVRSRA RLLAAGTVFM SLITAGIYLQ PGFSTPSLHQ EGDATVVSFL TPLLRGSRSS 
VAAAFITPRG VQYALWNSDY AKQYEIASLT KTMTSSLLIE AQQRGETTAQ TRVGELVPEI 
TGPASDITLA QLASHRSGLP PLATSLRQKI QVLKAIILRD NFWDYDEETL IDMVNNTSVK 
RPAGFDYSNT GYALLGLALA RASHQPFATL LQTRIFAQAQ MTESVVASDS TRDTPAFSHG 
WSASGLSEAP WVLHAFTPAA GVRSTIVDMA NYAQVLLAGK LAGSEAMSPQ FATDDPDSRV 
GYAWFTTRIQ GRDITWHDGE SSGFATAIAF DLQRKSAVVI LSDTAWPVIG PAIRLLLTQP 
SSETEAHREL D