| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2696 |
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| Symbol | |
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| ID | 8133649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3060093 |
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| End bp | 3060770 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865984 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003018262 |
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| Protein GI | 253689072 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.525187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTATC AGTGGGATTT TTCCGCCATC TGGCCTTACC ACCAGTTGCT GTTGGAGGGG
CTATGGGGAA CGATAAAGAT CGGTGCCACC AGCATCCTGA TCGGGATGGT GGCTGGCATG
GTGCTTGCCG CCATGAAAAT GTCGCCCCGG CAGCTCCTGC GCCTGCCCGC CGCGATGCTG
ATTGGCTTTT ATCGTAATAC GCCCGCGCTG GTGCACTTCT TCTGGATTTA CTACGCCCTG
CCCGTCATTA CGCCGTTAAC GTTTTCGCCT TTCACCGCCG CCGTGATCGC GTTGTCCGCA
CAGTCCGGTG CCTTTTATGC CGAAGTTTAC CGTGGTGCGA TTTCCTCGAT TCACGCGGGG
CAATGGGAAG GGGCCAAAGC GCTGGGTATG CCGAAATCGA CCGCGCTGCG TCGGGTTATT
CTCCCACAGG CATTACGCCG GATGATCCCG CCCTTTATTG AGCGCTCATT TGAACTCATC
AAATCGACAT CGCTGGCGTC CTCTCTGGCC TACAGCGAGC TGCTTTATCA GGCGATGCAG
ATAAACAGCC AAACCTACCG ACCGCTGGAA GTCTACAGTC TGGTGGCGGT GATGTATTTC
ACCCTGCTGC TTCTGATTAG CCTGTTCAGT CAACATATTG AGAAACGGCT GTCGCTGGCA
GACCGTCGGC TCGCGTAA
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| Protein sequence | MSYQWDFSAI WPYHQLLLEG LWGTIKIGAT SILIGMVAGM VLAAMKMSPR QLLRLPAAML
IGFYRNTPAL VHFFWIYYAL PVITPLTFSP FTAAVIALSA QSGAFYAEVY RGAISSIHAG
QWEGAKALGM PKSTALRRVI LPQALRRMIP PFIERSFELI KSTSLASSLA YSELLYQAMQ
INSQTYRPLE VYSLVAVMYF TLLLLISLFS QHIEKRLSLA DRRLA
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