| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2676 |
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| Symbol | |
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| ID | 8133629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3033000 |
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| End bp | 3034223 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865964 |
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| Product | drug resistance transporter, Bcr/CflA subfamily |
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| Protein accession | YP_003018242 |
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| Protein GI | 253689052 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAA CGTATTCCTT TGAAGCCCAA CGATTAACCG GAAAAATTGT CGCGCTTTTG
GCGGGGCTGT CGGCCATTAG CATCTTGTCT ACAAACATTA TTCTTCCGGC TTTCCCCGAT
ATCGGAGAAC AGCTTGGGGC ATCTCCCCGT GAACTTGGTC TGACGCTTTC CAGTTTTTTC
ATTACTTTCG CGCTGGCTCA ATTGGTTGTT GGCCCGCTAT CGGATCGCTA TGGACGCAAG
ACGCTCGTAT TGGGAGGACT TTCCATCTTC ATCGTTGGCA CGGTCGTCGG CGGCCTTGCT
GGTTCACTTG AAACGCTGAT TGTTGGAAGA GTTATTCAGG CGCTGGGGAT ATGCGCTGCC
GCAGTGCTAG CCCGTGCAAT TGCACGTGAT TTATTTGACG GTGAAACGCT GGCGCGGGCG
CTCTCCCTGA CGATGATCGC CACGGCAGCG GCACCAGGCT TCTCACCGCT GCTGGGAAGC
GTGCTGACCA CCACACTGGG GTGGCGAGCG ATCTTTATAC TGGTGGGGCT TGCCGCGTTT
GCCATCGCGG TCTTCTATGC TCATGGATTG GGAGAAACAC ATCCTGCTGA ACGTCGGGCT
CCATACTCGG TTCCAGGCGT GATATTGGCG TACGGTAAGC TGGTAGTGAA TGGGGCATTT
ATCCTTCCGG CACTGTCAAT GAGTCTGTTG ATGAGTGGAT TGTTTGCTTC TTTCGGTGCT
GCACCCACGA TTCTGATGAG TGGGATAGGC CTATCGTCAT TTCAGGCCGG GCTTTATTTC
GCCTCCACCG TGTTCGTTGT CTTTGGTGCG GGTATGGCCG CGCCGCGACT TGCCCACCGT
TATAGACCGC GAAGGATAGC GTCGGTGGGG CTCGCTATCG CGTTAGCCGG CGGGAGTTTG
CTACTGTTTG GGCCGAAGGC TCCAGGCCTG AGTTGGTATA CCTTTTCCAT GATCGTGTTC
CTCTGGGGAA TGGGCTTAGC CAATCCACTG GGAACGGCAA TAACCATGGG TCCTTTCGGA
AAAGAAGCGG GTCTGGCGTC TGCGCTACTT GGCTTCTTGA CGATGGGAAT GGCGGCGATG
ACAACCTGGC TGGGCTCTGT ACTGCCGTTT CCCCCTGTCA CCACGCTAGG TGGTATACAG
GCAACAGCCT GTCTGATTGC ACTGGTATTG TTTTGCTGTA GCGCATTCGT GAGAGCGAAT
ACGCGCTCAA GGGAAATCAT GTAG
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| Protein sequence | MAKTYSFEAQ RLTGKIVALL AGLSAISILS TNIILPAFPD IGEQLGASPR ELGLTLSSFF
ITFALAQLVV GPLSDRYGRK TLVLGGLSIF IVGTVVGGLA GSLETLIVGR VIQALGICAA
AVLARAIARD LFDGETLARA LSLTMIATAA APGFSPLLGS VLTTTLGWRA IFILVGLAAF
AIAVFYAHGL GETHPAERRA PYSVPGVILA YGKLVVNGAF ILPALSMSLL MSGLFASFGA
APTILMSGIG LSSFQAGLYF ASTVFVVFGA GMAAPRLAHR YRPRRIASVG LAIALAGGSL
LLFGPKAPGL SWYTFSMIVF LWGMGLANPL GTAITMGPFG KEAGLASALL GFLTMGMAAM
TTWLGSVLPF PPVTTLGGIQ ATACLIALVL FCCSAFVRAN TRSREIM
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