Gene PC1_2652 details

Gene Information

• Locus tag: PC1_2652
• ID: 8133600
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 3009226
• End bp: 3009810
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 644865935
• Product: phage baseplate assembly protein V
• Protein accession: YP_003018218
• Protein GI: 253689028
• COG category: [R] General function prediction only
• COG ID: [COG4540] Phage P2 baseplate assembly protein gpV
• TIGRFAM ID: [TIGR01644] phage baseplate assembly protein V

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0950236
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCAA ATGAGTTTGA CCGTCTCCTG AATAACCTGA TCCGTATCGG TACGGTTGTT 
GACGTCGATC ACTCCCGTTT TTTGGCGCGA GTGGTAACCG GCGGCAATAC CACGGGATGG 
ATACGTTGGT GTGTGCAGCG TGCGGGTGAT GCCAAAACGT GGTGGCCGCT GTCAGTAGGT 
GAGCAGGTTC TTATGGCTTC ACCAGGCGGC GATCTGGAAA CGGCTGTGAT CGTATTAAGC 
CTTTATTCCA ACCAGCACAG TGCGCCCAGC AGCACACCAA AGGTATACAC CACTGATTAT 
CCCGATGGTG CAAGCGAAAC GTATGATGCC AACACCTCAA CGATGACCGT TAAAGGCGTC 
AAAAATGTGA TCGTGGAAGC GGCTGAATCT ATCACGCTGG ACACCCCGAA AGTAATTTGC 
ACCCAGCATC TCAGCACTCA AACGCTCAGC GTAGAAAAAG GCGGCACGAT GCAGGGCGAT 
ATCACCCACA CTGGCGGCCA AATGTCATCA AACGGCGTGG TCGTAGACAG TCACACTCAC 
GGCGGCGTAC AGCGCGGTGG TAGCCAAACG GACGGCCCGC AATGA 

 

Protein sequence

MNSNEFDRLL NNLIRIGTVV DVDHSRFLAR VVTGGNTTGW IRWCVQRAGD AKTWWPLSVG 
EQVLMASPGG DLETAVIVLS LYSNQHSAPS STPKVYTTDY PDGASETYDA NTSTMTVKGV 
KNVIVEAAES ITLDTPKVIC TQHLSTQTLS VEKGGTMQGD ITHTGGQMSS NGVVVDSHTH 
GGVQRGGSQT DGPQ