Gene PC1_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2642 
Symbol 
ID8133590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3003104 
End bp3003949 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content54% 
IMG OID644865925 
Productcapsid scaffolding 
Protein accessionYP_003018208 
Protein GI253689018 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.612438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATTT CAAAACCGTT TCTTGCCGCT GTTGAAGGCG CGACCTGCGA CGGGCGCACT 
CTTGAACGTG CGCACATTTC GCAAATGGCG AAAAACTTCA ACAAACAGGT GCGCGGTGCA 
CGCGTGAACC TTGAACACAT TCGCGGTTAC TCGCCAACCA GCGATTTTCG TGCGTATGGC 
GACGTGGAAG AAGTGAGCGA GTTTGAGATT CAGGACGGGC CGCTCAAAGG CAAGTTGGCG 
CTACAAATCA AGATTGATGC CACTGATGAC ATGGTGGCAT TGAACACCAA ACGCCAGAAG 
ATTTACCCCA GCATTGAAAT TCACCCTTCT TTTGCTGACA CCGGCGAAGC CTATTTGATG 
GGGCTGGGAA TGACGGACGA TCCGGCCAGT CTGGGCGTCG GCATTCTGGA GTTTAACGCC 
AAGTGCGCTG GCAAAGGCCC GCTGGACGGG CGAAAAACCA GCCCTGAATG TTTCTTCACG 
GCCGCTGATA CGCCGATCAC GCTTGAATTT GAAGAAGAGG CACCCGCTGG CGAAGCGGGC 
AAAAACTTCT TTTCCCGCAT CACCGAATTG CTAACCGGCA GTCAGCAACG GTTCAGTAAG 
GAAAATGGCG AGCTGAAACA GGCGGTTGAG CTGATCGCCA AAAGCCAACG TGAGCTGCTG 
GATAAAACCG AAACATTCAG CGCGTTACAA GCGCAAAACA CCGAGCTGAA AGGCAACGTG 
GAGACGCTGA ATAAGTCATT AACCGAGCTG AAAGAACAGC TTGCCGGACA GGATGGCAAC 
TTTAGCCAAC GCCCCCCAGC TTCCGGCGGC AATCCGCAAT CCGGCATCGT GTTAGCTGAC 
TGCTAA
 
Protein sequence
MPISKPFLAA VEGATCDGRT LERAHISQMA KNFNKQVRGA RVNLEHIRGY SPTSDFRAYG 
DVEEVSEFEI QDGPLKGKLA LQIKIDATDD MVALNTKRQK IYPSIEIHPS FADTGEAYLM 
GLGMTDDPAS LGVGILEFNA KCAGKGPLDG RKTSPECFFT AADTPITLEF EEEAPAGEAG 
KNFFSRITEL LTGSQQRFSK ENGELKQAVE LIAKSQRELL DKTETFSALQ AQNTELKGNV 
ETLNKSLTEL KEQLAGQDGN FSQRPPASGG NPQSGIVLAD C