Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2487 |
Symbol | |
ID | 8133433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2855879 |
End bp | 2856421 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644865769 |
Product | hypothetical protein |
Protein accession | YP_003018054 |
Protein GI | 253688864 |
COG category | [R] General function prediction only |
COG ID | [COG3150] Predicted esterase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.156401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATCT ATTTACACGG TTTTGACTCA ACCAGTCCCG GTAACCATGA AAAGGTCCTA CAGCTTCAGT TTATTGATGA AGATGTACGG CTGATTAGCT ACAGCACGCT GCATCCGCGT CATGACATGC AACATCTGCT AAAGCAGGTG GACAAGATGA TTCAGCATTC TGACGACGAT CGTCCGCTGA TCTGCGGCGT GGGATTGGGT GGTTTCTGGG CAGAACGGGT CGGTTTCCTG TGTGACATAC GGCAAGTCAT CGTCAATCCT AACCTGTTCC CGCAGGAAAA CATGGGCGGG AAAATTGATC GCCCGGAAGA GTATGTAGAT ATCGCCACCA AGTGCGTGGC GAATTTTCGT GAAAAGAATC GCGATCGCTG CATGGTGATG CTCTCCCGTC ATGATGAAAT GCTCGACAGC CAGCGCAGCG CGCAGATGTT GGGAGCGTAT TACGAGATTG TCTGGGACGA CATTCAGACG CATAAATTCA AAAGTATCTC CCCCCATTTG CAGCGGATCA AAGCTTTCAA AACGCTGGGT TAA
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Protein sequence | MIIYLHGFDS TSPGNHEKVL QLQFIDEDVR LISYSTLHPR HDMQHLLKQV DKMIQHSDDD RPLICGVGLG GFWAERVGFL CDIRQVIVNP NLFPQENMGG KIDRPEEYVD IATKCVANFR EKNRDRCMVM LSRHDEMLDS QRSAQMLGAY YEIVWDDIQT HKFKSISPHL QRIKAFKTLG
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