Gene PC1_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2458 
Symbol 
ID8133404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2823208 
End bp2824254 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content56% 
IMG OID644865740 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_003018025 
Protein GI253688835 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACAAA CAGATGAACT GCGGAGCGCG CGCATCGAGA GTCTGGTTAC ACCCCAAACG 
TTACTCGCCA GACTCCCGAT CACCCCTGCC GTTGCCGAAA ATGTCACCTC GTCACGCAAG 
AAAATTGAAG CCATCCTAAC CGGTCACGAT CCACGTCTTC TCGTCGTGAT TGGCCCATGT 
TCGCTCCATG ACACCGACAG TGCGTTAGAT TATGCACGCC GTCTTGCTGC GCTGCGCACG 
CAGTATCAGG ATCGATTGGA AGTCGTCATG CGCACCTATT TTGAAAAACC GCGCACGGTC 
GTCGGCTGGA AGGGACTCAT TTCCGATCCG GCACTCAACG GCACCTTCCA GGTAAACGAA 
GGGCTAGAGA TTGCACGCCG CCTGCTGTTG GACGTCAATC AACTCGGGTT GCCGACCGCG 
ACGGAATTCC TCGATATGGT CACCGGCCAG TATATTGCCG ACCTGATTAG CTGGGGTGCG 
ATTGGCGCAA GAACCACTGA AAGCCAGATT CATCGGGAAA TGGCCTCGGC ACTGTCCTGC 
CCCGTCGGCT TCAAGAACGG CACAGACGGC AACACGCGCA TCGCCGTCGA TGCCATTCGT 
GCCGCCCGTG CCCAGCATAT GTTCCTTTCG CCGGATAAAC AGGGCTTCAT GTCGGTCTAC 
AAAACGCAGG GCAATCCGTT TGGTCATATT ATTATGCGCG GCGGGAAAAA ACCGAATTAC 
CACGCGGAAG ACATCGCTGC CGCCTGCGCT CATCTGCGTG AGTTCTCGCT GCCCGAGCAT 
CTGGTGATCG ATTTCAGTCA TGCCAACTGT CAGAAACAGC ACCGTCGCCA GCTCGATGTA 
GCCGATGACA TCTGCCAGCA AATTCGTGCG GGCTCACGCG CCATCGCGGG CATCATGGCG 
GAAAGTTTCT TAATTGAAGG CAACCAGCCT GCTATCAATC CTCTGGCATT GACGTATGGG 
CAATCCATTA CCGATCCTTG TCTGAGCTGG CAGGACACCG AAACGCTGCT GGCTCGTCTG 
GCAGACGCCG TCGACAGCCG TTTCTAA
 
Protein sequence
MLQTDELRSA RIESLVTPQT LLARLPITPA VAENVTSSRK KIEAILTGHD PRLLVVIGPC 
SLHDTDSALD YARRLAALRT QYQDRLEVVM RTYFEKPRTV VGWKGLISDP ALNGTFQVNE 
GLEIARRLLL DVNQLGLPTA TEFLDMVTGQ YIADLISWGA IGARTTESQI HREMASALSC 
PVGFKNGTDG NTRIAVDAIR AARAQHMFLS PDKQGFMSVY KTQGNPFGHI IMRGGKKPNY 
HAEDIAAACA HLREFSLPEH LVIDFSHANC QKQHRRQLDV ADDICQQIRA GSRAIAGIMA 
ESFLIEGNQP AINPLALTYG QSITDPCLSW QDTETLLARL ADAVDSRF