| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2442 |
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| Symbol | |
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| ID | 8133388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2804346 |
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| End bp | 2804582 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644865724 |
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| Product | LPP repeat-containing protein |
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| Protein accession | YP_003018009 |
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| Protein GI | 253688819 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4238] Murein lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000387277 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCGTA CTAAACTGGT ACTGGGCGCG GTAATCCTGG GTTCTACTCT GCTTGCTGGT
TGTTCAAGCA ACGCTAAAAT TGATCAGCTG TCTTCTGACG TTCAGACTCT GAACGCTAAA
GTTGACCAAC TGAGCAACGA CGTGAACGCA ATCCGCTCTG ACGTACAAGC TGCTAAAGAC
GACGCAGCTC GTGCTAACCA GCGTCTGGAC AACCAAGTTC GTACTTACAA AAAGTAA
|
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| Protein sequence | MNRTKLVLGA VILGSTLLAG CSSNAKIDQL SSDVQTLNAK VDQLSNDVNA IRSDVQAAKD
DAARANQRLD NQVRTYKK
|
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