| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2354 |
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| Symbol | |
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| ID | 8133298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2707867 |
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| End bp | 2708937 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865634 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003017921 |
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| Protein GI | 253688731 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.534498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGAA ACCTGAAAAT ACGTGAAATT GCGCAGCGGA CAGGCTACTC GATCAGTACG
GTTTCACGCG TATTGTCTGG TCAGTCCAAT ACCAGCGATC ACGCAAAAGC AGACATTCTC
AACTGTGCCC GCCAGTGCGG CGTACTGGCC GATCTTGCCA ACGGCCGCCT GCTCTTGAAC
GGGCTGACGA TATTCGCCCC GCCGCGCGCT TTTGATATTC GGTCCGACAT CTTCTATCAC
AAAGTGGTAC AGAGCATCAT TGATGCCCTG AAGCCACACG ATGTGCGAGT GAGGTACTGT
GGACTGGAGG AAAATGACAG CGATGCCGCG CTCTTTTTAG ACAAAATGCG CGATCCGGCC
ACGGAGGCGG CGCTGCTGAT CGGCATCGAC GATCCCTATA TTCACGCGCT GGCGGCAGAC
AGCGGTAAGC CCTGCATATT GATTAACTGT CTCGACCGTA AGATGCGATT ACCGGGTGTG
GCACCGGCGC ACCGGTTAAT CGGCGAGTTC TCCGCGCACT ATCTCTTCGA GCAAGGACAC
CATACCGTGT TGACGCTGTT ATGCCTGCGC CGCTACACAA TGGAGCTACG TCTGGACGGT
ATCCGGGATG CCTATCAGTA TCATAATCTG CCGTTTTCCA GCGGGGAGAA CTTGCTGTCG
TTAGATAATT TCAGCACGGC AGATGCGGAA CAGGCGATGA CCGCCTTTTT GTCACGCTGT
CCGCAGGATA AATGGCCTAC GGCTATTCTG GCAGGCGGTG ATTTCATCGC GGTCGGGGTG
GTCAATGCGC TGCATAAGGC GGGGTTACGC GTACCGCAGG ATGTCTCGGT GATGAGTATG
GATGGCTTCA ATCTGTCGGC CATTCACGAT GTGCCGCTAA CGTCGGTACA CGTGCCGCGT
GAAGCGCTAG GCGAAGAAGC CGTCAGGCTG CTGCAATATC GTTTGATCCG TCCCGAAGCC
CCGGTTGGCA ACACGCTACT CAACGGTACG CTGGTGGCGC GCCAGTCCGT CAGACGGCTA
CGCGCCAGTA AATCGGTTGC CCCCGTACAG GACGAAAGCC TTTACGACTG A
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| Protein sequence | MKGNLKIREI AQRTGYSIST VSRVLSGQSN TSDHAKADIL NCARQCGVLA DLANGRLLLN
GLTIFAPPRA FDIRSDIFYH KVVQSIIDAL KPHDVRVRYC GLEENDSDAA LFLDKMRDPA
TEAALLIGID DPYIHALAAD SGKPCILINC LDRKMRLPGV APAHRLIGEF SAHYLFEQGH
HTVLTLLCLR RYTMELRLDG IRDAYQYHNL PFSSGENLLS LDNFSTADAE QAMTAFLSRC
PQDKWPTAIL AGGDFIAVGV VNALHKAGLR VPQDVSVMSM DGFNLSAIHD VPLTSVHVPR
EALGEEAVRL LQYRLIRPEA PVGNTLLNGT LVARQSVRRL RASKSVAPVQ DESLYD
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