Gene PC1_2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2341 
Symbol 
ID8133285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2691782 
End bp2692222 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content54% 
IMG OID644865622 
Producthypothetical protein 
Protein accessionYP_003017909 
Protein GI253688719 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.438637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAG AAATCAGTCT TAAAGTTGAA AACTTTGCCC GTGAAGCCGA ACTGCCTGAC 
GGCGTGTTTC ATGACCCGCT GATGTTTGTC AGTGTGGTAC GCGGCGGAAT TTCCGGCGCG 
ATGCTGAAAC GTGGTGCGGA TGCCAGCGGG CTAAGCCGTA AGCTAATTGG CTCGGCGCTA 
TCCGTCGATC CCTCGAACAT TTCCCGTTTG TTCCGTCGTA AGCATTTAAC ACTGGAGCAG 
GGAGAGGCCG CGCTGGAAAC ATTTCGTTTA TGGCTGAAAG CCATGACGAC ATTTGAAGAT 
GAAGCGAAGG CACAGCTGTG GATGGAGAGC GGTATCCCGG CCTTTGGCGG GAAAACGCCA 
GCGGAAATGC TGGATACGCA CAAAGGGCGC CAGCTGGTTG ATAATGCGCT GAGCCGGATC 
GAATACGGCG AATTCATATG A
 
Protein sequence
MNAEISLKVE NFAREAELPD GVFHDPLMFV SVVRGGISGA MLKRGADASG LSRKLIGSAL 
SVDPSNISRL FRRKHLTLEQ GEAALETFRL WLKAMTTFED EAKAQLWMES GIPAFGGKTP 
AEMLDTHKGR QLVDNALSRI EYGEFI