| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2239 |
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| Symbol | |
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| ID | 8133183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2573535 |
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| End bp | 2576606 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644865526 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_003017813 |
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| Protein GI | 253688623 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.716202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CCATGGCACT GAACCATCCG ACTACGATCA CCGATAGCGA TAACTGGCAA
ATGCTGGCAA AAATCCGGCA ATCCTGTCGT GATAATATCC ATATAAGCGG AGGCCTCCCC
GCCGGACAAG CCGATATTCT CGTGTGCCTC ACGCTGTATA ACGAACCGGC TCCCATGCTT
GCCGATACGC TGGCAGGGCT GGTTCGTAAT CAGCAAGAGT TAACCACAAC GTTTGCCAAT
CGTCCGCCCA ATATCATCAT TTGCATCCTA CTTGATGGCA CCGACAGCGC TCACCCATCA
ACGGTCTCGC TTTTAGCCTC ACTGGGATTA CTGCCAGTGC AAACGCCCAC ATCGGACAAA
CAGAGCAATT CATTGACGCT TCAGGTCAGT GAACAGTCAA CCTCTCATAT TCTGCGCTGC
TGTGATCAAT CTGGGATAGC TGAAAGCGCG GAGCAGAACA TGACGCTACT TCTTGCCAAC
AAGCGCCATA ATGCAGGAAA GCTGGATAGC CACGCCTGGT TTTTTTGGGG CGTTGGGAGT
GCCGTTAAGG CCGAATTTGC CATGCAGATC GATGCGGGCT CGGTGACAGA GTCGGTATGT
TTGATACAGT TGCTACAACA TATGTGGCGA GATCCTTATT GTGGGGCCGT CACAACGCGC
GTTATGCTCC CGGTTCCCAC GGATGCAAAC CTGGCACAAA ATTGGCAATA CGCCGATTTT
ATTTGGGAAA AAGTCAGTGA TTGGGCCATC GGCAGTGCTC TGGATTATCT GGAAGTGGTT
CCTGGACAAT GCAGTATGAT TCGATGGAGC CAATTTTGTG AAAATCACGG ACATCCGCAC
GCGCCGATTG AGGCCTATCT GCGTGGGTTA ATTCCCCAAG GTTTATTAGA GCGTAACCTG
TTTCTAGCGG AAGATCGGGT TATGGGGTTT GAACTGGCCA CACACCATCA AGGGAGTGGG
GTACGTTATG AGCAAGGTGC CGTTGTACGT TCAGACCCAG CGCCTACCTT CATAGAACTT
CTGCGCCAGC GACGACGTTG GGTCAACAGT ACCCTTGCCG CTCGCTTACA CTCGTTATCC
CGATTGCCCG AGGTGATAAC GCAGTCCTCT CTTTCGCCAA TGCGGCGCTG CAATGTTACG
CTTTCTTTAC TTTGGGGAAT GTTACAGTTT ATTTCTCAAT TTATGATGCC CTCATTTAGC
GCCATTTTGC TCGCGGCAGG TGTACACACA TTTGTCAGCC GTATCCTGCC AGACGCCAAT
CCGTCACTTA ACACCACTGC AGCCATAGGG GCGGCACTGC TTTTTATTGT CATCTGGATC
GGAACGCTCT GTATGAACCG TAGAGCCACG TTGAATAATG AGGCTGGCAC GTGCTACCAC
ATCGCTGCGA TGTCGGTACT CGGAGGATTA CTGGGAGCGG CATGTATCCT GGCACTGTTG
GAAACCTCCA TAACGAACGT CAGCCTCATG GGCGTGGCTC TGTTACTGCT TTGCCTTGCC
ATAGGCCTGC ATTCATGGAG TTATCTACGG CAGTTCCTAC GCTGGATGCC CCTTTACCTC
ATTCTATTAC CGATTTTCAG CCTCTATCTG ACAACCTACT CCATCGCCAA CATTAATGAT
GTCAGTTGGG GAACCAAAGG CTTGACCACT CATCAGGCTG GGGATAATAA ACAAAAATCG
TGGGCGCGCG CACGCGACAA ACTGCTATTT ATCTGGGGAG CCGGTTCACT GACCGTCGTG
TTACTGTTCT TGCTGGCACT CCCTAACACG CAATGGATGT TCATTATCCA ATGTGCTGCC
ATATTTTTCT GCGCTCGTAT AATACTGTCA TCCATCACCA GCATCGGTGC CAGTATCACC
AGACGATTAC GCACGCCGCG TAAACACGCA TCCGTTCCCT TTGTCGATCG CGTTGAATCA
CCAGTCTCCT CCTTGCTCCC TATCGTCAGG CCGGTTTTCC CACCTTTCGA GTCATTCGCG
TCGATCATAG AAGAGAGTCT TACCCGCGGT AATGTCACTA ATAATGGCCC CTATGTTCGC
CAATTGGAAA ATCGGCTAAC TGAATATCAA TCGGTTCCCA CACGCGTATT CTGTAACGGT
GAGCAGGCAT TAATCGCCCT GTTACTGGCC GCCGACATTC AGGGCAAAGA CGTTATTGTC
CCCTCATTTA CCTTTGCTGG CACGCCTCAT GCTGTCGTTA TGGCCGGGGG AACGCCAGTT
TTCGCTGATA TTAAAAGCCA GGATTGCCCG CTGCTGGATC CCAACGATGT TATACGTCGC
ATCACTGCGA ATACTACCGC GATTGTCGCT GTGGACGTTT ATGGCTATGC CAGCGACTAT
GCCGCATTAC AACAAATTGC GCGAACCCAC GGACTGCGGC TGTTTATCGA CAGTGCCCCT
GCTTTTGGCA CCACGATTAA TGGACAACGG ATCGGTGGCT TCGGCGATGC GCAAATTTTC
AGTTTTCACG CAACGAAGTC GTATAACACC ATTGAAGGTG GCTGCCTATG CAGCCATGAC
GCAGAACTCA TCAAACGTGC CGAAGCGATT CGCAATTTCG GGCAGGATAC ATCGGGTATC
TGCGTCGTTC CTGGACTGAA TGGCAAGATG AGTGAACTCA ACGCGATTAT CGGGCTGGCA
CAACTCCCTT ATTTGGAATC CCAATTAACA TGCCGTCGGC AAGCGGCGTC GCGTCTGATT
ACAGATATGA CCTCCATTCC CGGCCTGACC CCCTGCTTAC CCCCCGAGGG ACAATCCCCT
GTCTGGCAAT ATCTCCCCAT TTACGTAGAT GCAAAGCGCT ATGGTATGAG CCGTAATGAC
CTGCAACACG CGCTGCATGC ACAAGGGATC ATGGTGCGCA GCTATTACGC ACCAGCCTGT
CATCTCATGC CCGCCTATGC AGGGAAGCCG CAGGCCTCAC TCCCACAAAC CGAACTTCTG
TCTGCATGTG TTTTGGCATT GCCAATTTAC AACGACATGA CGGAGAAAGA ATGCGAACTC
ATCCTTACTT CACTCAGCGC ATTAGCCCTT TCTCCCCTCA CTCACCACGT TGCTGAAGGA
GTTCACGCAT GA
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| Protein sequence | MKKTMALNHP TTITDSDNWQ MLAKIRQSCR DNIHISGGLP AGQADILVCL TLYNEPAPML
ADTLAGLVRN QQELTTTFAN RPPNIIICIL LDGTDSAHPS TVSLLASLGL LPVQTPTSDK
QSNSLTLQVS EQSTSHILRC CDQSGIAESA EQNMTLLLAN KRHNAGKLDS HAWFFWGVGS
AVKAEFAMQI DAGSVTESVC LIQLLQHMWR DPYCGAVTTR VMLPVPTDAN LAQNWQYADF
IWEKVSDWAI GSALDYLEVV PGQCSMIRWS QFCENHGHPH APIEAYLRGL IPQGLLERNL
FLAEDRVMGF ELATHHQGSG VRYEQGAVVR SDPAPTFIEL LRQRRRWVNS TLAARLHSLS
RLPEVITQSS LSPMRRCNVT LSLLWGMLQF ISQFMMPSFS AILLAAGVHT FVSRILPDAN
PSLNTTAAIG AALLFIVIWI GTLCMNRRAT LNNEAGTCYH IAAMSVLGGL LGAACILALL
ETSITNVSLM GVALLLLCLA IGLHSWSYLR QFLRWMPLYL ILLPIFSLYL TTYSIANIND
VSWGTKGLTT HQAGDNKQKS WARARDKLLF IWGAGSLTVV LLFLLALPNT QWMFIIQCAA
IFFCARIILS SITSIGASIT RRLRTPRKHA SVPFVDRVES PVSSLLPIVR PVFPPFESFA
SIIEESLTRG NVTNNGPYVR QLENRLTEYQ SVPTRVFCNG EQALIALLLA ADIQGKDVIV
PSFTFAGTPH AVVMAGGTPV FADIKSQDCP LLDPNDVIRR ITANTTAIVA VDVYGYASDY
AALQQIARTH GLRLFIDSAP AFGTTINGQR IGGFGDAQIF SFHATKSYNT IEGGCLCSHD
AELIKRAEAI RNFGQDTSGI CVVPGLNGKM SELNAIIGLA QLPYLESQLT CRRQAASRLI
TDMTSIPGLT PCLPPEGQSP VWQYLPIYVD AKRYGMSRND LQHALHAQGI MVRSYYAPAC
HLMPAYAGKP QASLPQTELL SACVLALPIY NDMTEKECEL ILTSLSALAL SPLTHHVAEG
VHA
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