Gene PC1_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2210 
Symbol 
ID8133154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2540871 
End bp2541416 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content55% 
IMG OID644865498 
Producttype III secretion protein 
Protein accessionYP_003017785 
Protein GI253688595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACC GACAGATTGC GTCATCCGAA TCTACGGCGA CGCAGAACGC GCAGGCCGTA 
CTGCACGGTA AATCCTCTCG CGCAGACGGC TCACAGCATG ATCCACAACC CGATCTACAA 
CATAGCGATT TCTGGGAAGC CTTCACATTT TCAGATGGCT TTGAAGACGC GTTCTATCAG 
GATACGCCAG TCGCTTTATC ACCGGGCGGT GCTCTCAATG CCCCGTTGCC GTTGCAGACT 
GACGCGTCGG ACAACCCACA ATATGTGACA CCGTCACCGT GGCAGCCACT GCAATGTGAA 
CTGATTGAAG CAATGGACAA CATCTGCGCC CCACCGTTTG CCTTTAGCCT GCAACTGCCG 
CAGTTGGGCG ATATCGATGC ACGCTTAGCC ACTCTGGTAC CGCGCGGCTG GGATATTTCT 
CTGCGTTTTA GCCGGGAAAG CTACCACCAG TTAAAAGATC GGCGCGAAGC CTGCCGCCAT 
TCGCTCGCCA GCGCGTTGGG TTGCCCGATA AACCTGCGTT TTGACGCCAG GGAGTATGAG 
CGATGA
 
Protein sequence
MNNRQIASSE STATQNAQAV LHGKSSRADG SQHDPQPDLQ HSDFWEAFTF SDGFEDAFYQ 
DTPVALSPGG ALNAPLPLQT DASDNPQYVT PSPWQPLQCE LIEAMDNICA PPFAFSLQLP 
QLGDIDARLA TLVPRGWDIS LRFSRESYHQ LKDRREACRH SLASALGCPI NLRFDAREYE 
R