Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2171 |
Symbol | |
ID | 8133115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2484186 |
End bp | 2485307 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865459 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003017746 |
Protein GI | 253688556 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATACA CTGGGAAGTA CCTGAAGAAA ACAGTGCTGA TGCTGGCTAT GATGGCCGGT CTCAGCGTCG GGCAAAGTCA GGCTGGCGTC GAAATTGAGA CGCGCTCGCT GGATCAAATC TATAAGAGCG CGTTGAGAGA AGGCGGAACG GTTACCGTTT ACGCTGGCGG TGACGTGCAG TCGCAGCAGG CTGGTTTCAA GCGGGCATTT GAGACACGTT TTCCTGGCAT GAAACTGAAT GTGATTGTCG ATTACAGCAA ATACCATGAT GCCCGTATCG ATAATCAACT GGCGACCGGC ACTCTGATTC CTGATGTGGT GCAACTGCAA ACGGTGCAGA ATTTCCCACG CTGGAAAAAG GAAGGGGTTC TGCTGAACTA CAAAGCGCGT GGCTGGGATA AAATCTATCC GGAATTTCGT GATGCAGATG GTGCTTGGAC CGGTGCCTAT GTCATCGCAT TCAGTAATTT GGTCAACACC CAGCTTCTGG ATGAAAAATC CTGGCCGCGT GAAGCTAATG ATTACCTTCG TCCCAATCTG AGGGGCAACC TGATTCTGGC CTATCCTAAT GACGACGATG CGGTGCTGTT CTGGTACAAG CTGGTCGTGG ATAAATACGG CTGGGATTTT GTTAAAAAAC TACAGGAGCA GGACCCCGTC TACGTGCGCG GCACTAACGT CCCCGGTGCT GAAATCGCGA CGGGAAAATA TAGCGCAACG TTTACCAGCT CCGGCGCGCT CGTTCCGGCT GCGGATGCTG TGACCCGCTT TGTGTTGCCG AAGTCCGATC CTTTTGTTTC CTGGGCGCAA CGCGCCGCTA TCTTCAAACA GGCTAAACAC CCAGAAAGCG CCAAGCTGTA CCTGAGCTGG GTACTGGATC CGCAAACGCA AACTCAGGTT TCGCGTATGT GGTCTGTGCG TACTGACGTT GCGCCGCCAG AGGGGTACAA GCCTATCTGG GAATACCGTA ACACCCGCCC GCAGGCGTTT GCTGATTTCA TGTACGATCG TGGTGCGGTC GAACGTTTCC GCGCACAGAT GAGCCTGTAT GTCGGCGAAG CGAAAGGCGA ACCTACGCCG GGATGGCTTG GCGTGCACCC AGAGGTGCCT CTGGTTAACT AA
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Protein sequence | MQYTGKYLKK TVLMLAMMAG LSVGQSQAGV EIETRSLDQI YKSALREGGT VTVYAGGDVQ SQQAGFKRAF ETRFPGMKLN VIVDYSKYHD ARIDNQLATG TLIPDVVQLQ TVQNFPRWKK EGVLLNYKAR GWDKIYPEFR DADGAWTGAY VIAFSNLVNT QLLDEKSWPR EANDYLRPNL RGNLILAYPN DDDAVLFWYK LVVDKYGWDF VKKLQEQDPV YVRGTNVPGA EIATGKYSAT FTSSGALVPA ADAVTRFVLP KSDPFVSWAQ RAAIFKQAKH PESAKLYLSW VLDPQTQTQV SRMWSVRTDV APPEGYKPIW EYRNTRPQAF ADFMYDRGAV ERFRAQMSLY VGEAKGEPTP GWLGVHPEVP LVN
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