| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2164 |
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| Symbol | |
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| ID | 8133108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2474611 |
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| End bp | 2476413 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644865452 |
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| Product | allophanate hydrolase |
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| Protein accession | YP_003017739 |
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| Protein GI | 253688549 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.407047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGAA TGACAGGACT CACGCTTCAG GAATGGAAAC AGCATTATCA CCAGCAGGCC
GATCGCGTTG GTGAAACGCT AGGCGCGCTG CTCGCCAGTT TGTCGACGGA CGATCCGGCG
TGGATCGCGC TGGCAACCCC TGAATTGCTT CAGGCACAGA TCGCGGCGCT CTTGCCTCGG
TATCGTGAAA ATCCAGACGC GCTGCCGCTG TTCGGCGTTC CTTTTGCCGT CAAAGACAAT
ATTGATGTTG CAGGCTGGCC GACGAGCGCG GCGTGTCCGG CGTTTACCTA TCTGGCCGAC
AACGATGCGA CTGCCGTTGC CAAACTGAAA GCGGCAGGGG CGATTGTCAT TGGCAAAACC
AATCTCGATC AGTTTGCGAC CGGTCTGGTC GGTACGCGCT CACCGTTTGG TGAGGTGCCA
AACACCTTTA ACGCGGACTA TGTTAGCGGG GGCTCCAGTT CAGGTTCGGC CTCGGTGCTG
GCGCGCGGGC TGGTTGCGTT TTCGCTGGGA ACCGATACCG CTGGATCGGG GCGCGTTCCC
GCCGGGTTTA ACAATATTGT CGGCCTGAAG CCGACAAAAG GGTGGTTATC GGCAAGCGGT
GTCGTACCGG CCTGTCGCCT GAATGACACT ATCTCGGTAT TTGCGCTGAC CGTTGAAGAC
GCCTTTACCG TCGCTGAACT GGCTGGCGGA TACGATGCCG CGGATGCCTA CTCGCGCAGC
CATCCCGCCA GTGCGCCTGC GTCGCTGTCA GCGACGCCGC GCTTTGCTAT CCCCAGCGAT
CCCACTTTCT TTGCTGACGC TGTCGCTCAG GCGGCCTGGC AACACGCACT GGTCGAATTG
GAAGCGACGG GTGCGACGCT ACATCCGATC GATTTCAGTA TGTTCACGCA GCTAGCCGAG
CAACTTTATC AAGGCCCCTG GGTGGCAGAA CGCACCGTCG CGGTGGGCGA CATGCTGCGG
CAACCCGAGA ACATGGATCC CGTGGTGCAC GGTATTGTGG CGAGCGGCGA ACGCTTCAGT
GCGGTAGAAG CGTTTAAAGC CGAGTACCTG CGTGCTGAAC TGACGCGTCA GATTCAGCAG
ACGCTGGCGT CGTTTGACGC GTTAGTCGTG CCGACATCGC CGACCATCCA CACGCGTGAA
GCGATGAAAC AGGAACCGGT GCGCTACAAC TCCCAGTTGG GCGCCTACAC CAACTTTACC
AATCTGGCCG ATCTCTCGGC ACTGGCGCTG CCAGCCCCTT TCCGCACGGA TGGTTTGCCT
GCGGGAATTA CGTTGATTGC GCCCGCCTGG CACGACCGTG CATTAGCGAG CTTCGGCTTG
CGCTGGCAGG CACAGCTGGC GCTTACGCTG GGGGCAACAG GAAAAACGCT GCCTGTAGGA
CAGGCTACCT TGCCGCCTTC CACATTACAC GTTCGTCTTG CCGTCGTCGG TGCGCACCTG
ACGGGCATGC CGTTGAACCA TCAGTTGACC CGCCGTGATG CCGTACGGGT GGAAGAGACG
CGCACGGCGG AAAACTATCG TCTTTATGCG CTGGCGAATA CGCAACCGGC GAAACCCGGT
TTAGCGAAAA GCACCGATGG TGCGGCGATT ATCGTCGAGC TGTGGGACAT CCCGCTGGCG
CGTTTTGGTG AGTTTGTCGC AGAGATTCCG GCGCCGCTGG GTATTGGCAC GCTGACGTTA
GCTGACGGAC GGCAGGTTAA AGGCTTTATT TGCGAACCGG CTGCGCTGAG CGACGCCGTG
GATATCACGG AATTCGGCGG CTGGCGCAAC TGGCTTGCCC GTCAGGAGGC GTCTCATGTT
TAA
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| Protein sequence | MPRMTGLTLQ EWKQHYHQQA DRVGETLGAL LASLSTDDPA WIALATPELL QAQIAALLPR
YRENPDALPL FGVPFAVKDN IDVAGWPTSA ACPAFTYLAD NDATAVAKLK AAGAIVIGKT
NLDQFATGLV GTRSPFGEVP NTFNADYVSG GSSSGSASVL ARGLVAFSLG TDTAGSGRVP
AGFNNIVGLK PTKGWLSASG VVPACRLNDT ISVFALTVED AFTVAELAGG YDAADAYSRS
HPASAPASLS ATPRFAIPSD PTFFADAVAQ AAWQHALVEL EATGATLHPI DFSMFTQLAE
QLYQGPWVAE RTVAVGDMLR QPENMDPVVH GIVASGERFS AVEAFKAEYL RAELTRQIQQ
TLASFDALVV PTSPTIHTRE AMKQEPVRYN SQLGAYTNFT NLADLSALAL PAPFRTDGLP
AGITLIAPAW HDRALASFGL RWQAQLALTL GATGKTLPVG QATLPPSTLH VRLAVVGAHL
TGMPLNHQLT RRDAVRVEET RTAENYRLYA LANTQPAKPG LAKSTDGAAI IVELWDIPLA
RFGEFVAEIP APLGIGTLTL ADGRQVKGFI CEPAALSDAV DITEFGGWRN WLARQEASHV
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