Gene PC1_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2080 
Symbol 
ID8133024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2380769 
End bp2382577 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content49% 
IMG OID644865369 
Productreplication protein A 
Protein accessionYP_003017656 
Protein GI253688466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.292515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTTCG GGGCGTTTAT TGTGATTTCT GAGCGGCTAG CTATTGCAGA TGAAAATTTT 
TCTCATTATA AAAAATTGGG AAAAATTTTT TTGCGTGACC GTCAGGGAAT AGCCCTGAAA
TCTCAGGAGC TGGCATCTGA ATTTAAAACG ATTATCGGTG GATTAGACAT TAACGAATCC
ATCGACACGA GTTTCAAAAA TATTTTTACC AAAAACTATT TTAGTTCTGA TTTTGATGAG
TCAGATATTT TAGTTTTTGA TGAAAAATTA GTTTCTGGCC TGTCGGCTCT GCATAGCGAG
AGAGATTTTT TTAATCTGGG AAAAATTCAG ATCCCTGAAT CGCGCAATTT TTTTGAAAAT
TCTGTTTTTA TGCGCGTTTC GCGCGCCGTC CGTGCATATG GGTTGGAAAT GCCAAAAATT
CGGGAAATTT TAGATTTTCT GGAAATTCCT TTCTCTAATT GGCCCGATGA AACCCAAAAT
GTCTTTTATG GTTCGCTGAC CCGCATCTCA GCGCCGGAAT ATTGGCAGCA AATTTTATGG
CGTATCCGTT GTCACTGGGC GGGTTGTCGT GATGCAGCTA AAAATCTCGT TCATAAAAAA
ATCTCTCCCT ACATCTCTAC ACGGGCGCTG CGGGAATTCG CGGCGAGTCA GCAGAGGATG
AAAACGTTTT TAGAAAAAAA CGAGCTGGAA TCCTCTGATG GCGACCGAAT CTCACTAGAG
GCGGCCTATA ACTCAGGCAA CTCGTGCCCA AAAAACCGCC GCACTGAATT AATGACTCGA
TTGCGCCACA CCGGGGAGTT TTTCACCTCC GAGGGTTACG CTGGGTATTT TTTGACTATC
ACGCTGCCGT CCCGTTATCA CTCCAATCGC GTTAACGGCA GCGAAAATGA GCGTTGCACA
ATCATCAATC CCCGCGTAGG TCAGGGGGAG CTGTCTCGAA TTTGGCGAAA CGTTGGTCGA
AAATTCGCCC GAGAAAATAT TTTTTTCGGC GGATTTAGGT TTGTAGAGCC TCAGCACGAC
GGCACCCCAC ATTGGCATGT GTTGGTCTGG TTCGACCCAG AACAGGCAGA TATGGCGCTA
GAAATCCTCC GCGACCGCTA TTGTGCTCAG GATTACGGGA CGATCGCCCA CAACCCCGAA
ATTAGATTCA AGGTTTTGCC CATCGATCCC GAGCGTGGCG CTGCCGCGTA TTGTGCGGCC
TATGTTTCTA AAAATGTTGA TGGATTTCAA CTGGATGGAG ATTCTGAATC CGGATTGGCC
GCTGCTGACG GCGCAACCCG TGCAACAGCA TGGGCTCGCC TGTACGGGAT TCGCCAGTTC
CAGCAGTTCG GGTGCGTGGG GGCGACCGCA TGGCGCGAAC TACGCCGCCT GCGGCAGTCT
CCAGATTGCG ATCCGACTCT GTGGGATTTC TGGCAGGCCG CTGACGAGGG AGATTTTGGG
CGGTTTATAC GCCTGTCGCG GGAACACGGC GGGGTTTCAC TATACCGCGC CGACGAGGAT
TTTGCTGGTC AGGAAATCCG CAATTGCTGG GGTGAAAAAA CGAGCAGAGT TCGGGGCGTA
TCCCTGTCCG CCGACCCGTC AACTCGCGTG CAGACCCGTA CCCGCGATTG GAATATCGTT
CCAAAACAGA TTGAAAATCA ATCTGTTTCT GACGCCGTTC AGCGTTGCGG CACGCTCGCC
TCTTGGACCA GTGGGAATAA CTGCCCGCAG CGATTCCAGC GGGAGCAGGA AAATGTCGAT
TTTTTTATCA ACAACATTCA CACCGATTAT CGCGAGGCTC CCGATGCCGC TGCCAGATTA
CGAATTTGA
 
Protein sequence
MFFGAFIVIS ERLAIADENF SHYKKLGKIF LRDRQGIALK SQELASEFKT IIGGLDINES 
IDTSFKNIFT KNYFSSDFDE SDILVFDEKL VSGLSALHSE RDFFNLGKIQ IPESRNFFEN
SVFMRVSRAV RAYGLEMPKI REILDFLEIP FSNWPDETQN VFYGSLTRIS APEYWQQILW
RIRCHWAGCR DAAKNLVHKK ISPYISTRAL REFAASQQRM KTFLEKNELE SSDGDRISLE
AAYNSGNSCP KNRRTELMTR LRHTGEFFTS EGYAGYFLTI TLPSRYHSNR VNGSENERCT
IINPRVGQGE LSRIWRNVGR KFARENIFFG GFRFVEPQHD GTPHWHVLVW FDPEQADMAL
EILRDRYCAQ DYGTIAHNPE IRFKVLPIDP ERGAAAYCAA YVSKNVDGFQ LDGDSESGLA
AADGATRATA WARLYGIRQF QQFGCVGATA WRELRRLRQS PDCDPTLWDF WQAADEGDFG
RFIRLSREHG GVSLYRADED FAGQEIRNCW GEKTSRVRGV SLSADPSTRV QTRTRDWNIV
PKQIENQSVS DAVQRCGTLA SWTSGNNCPQ RFQREQENVD FFINNIHTDY REAPDAAARL
RI