Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1980 |
Symbol | |
ID | 8132924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2273628 |
End bp | 2274539 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644865270 |
Product | UTP--glucose-1-phosphate uridylyltransferase subunit GalU |
Protein accession | YP_003017557 |
Protein GI | 253688367 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1210] UDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01099] UTP-glucose-1-phosphate uridylyltransferase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.404534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTATTG TGAATAAAAA AGTAAAAAAA GCGGTCATAC CGGTTGCTGG ATTAGGGACG CGTATGCTGC CTGCCACCAA AGCCATTCCT AAAGAAATGT TGCCGTTGGT AGATAAGCCG CTGATCCAAT ATGTTGTTAA TGAGTGTATC GCTGCAGGGA TTAATGAAAT TATTCTGGTT ACACACTCTT CTAAGAATTC TATCGAAAAC CATTTCGATA CCAGTTTTGA GCTGGAAGCC ATACTAGAAA AACGCGTTAA ACGTCAGCTG TTGGAAGAAG TTCAATCTAT CTGTCCTAAA CACGTCACCA TTATGCAAGT GCGTCAGGGA TTAGCTAAAG GGCTGGGCCA TGCCGTATTG TGCGCGCACC CGTTAGTGGG AGATGAACCC GTCGCAGTTA TTCTGCCGGA TGTGATTATT GATGAGTATG CATCCGATCT GAAGAAAGAT AACCTGAGCG AAATGTTGCA ACGTTTTTCT ACTACAGGCC ACAGCCAGAT TATGGTTGAG CCGGTTGAAA ATGTAAGCAG CTATGGCGTG GTTGATTGCA AAGGTGTGGA ATTAAAAGCA GGGGATAGTG CACCTATGGT GGGCGTGGTT GAAAAACCGA AAGCTTCCGA GGCACCGTCT AATTTAGCCG TCGTTGGCCG TTATGTACTC TCTGCGGATA TTTGGTCCCT ACTGGAGAAA ACCCCGCCGG GTGCTGGCAA TGAAATTCAG TTAACCGATG CCATCGCAAT GTTGATGGAA AAAGAGACGG TAGAAGCCTA TCACCTGAAA GGTGTGAGCC ATGACTGTGG TAATAAATTA GGCTATATGC AGGCATTCGT GGAATATGGT TTGCGCCATG ACGGTTTAGG TCAGGAATTT GCGCAATGGC TGCAGGAAAC GATTGAAGCA GAAGAAAAAT AA
|
Protein sequence | MSIVNKKVKK AVIPVAGLGT RMLPATKAIP KEMLPLVDKP LIQYVVNECI AAGINEIILV THSSKNSIEN HFDTSFELEA ILEKRVKRQL LEEVQSICPK HVTIMQVRQG LAKGLGHAVL CAHPLVGDEP VAVILPDVII DEYASDLKKD NLSEMLQRFS TTGHSQIMVE PVENVSSYGV VDCKGVELKA GDSAPMVGVV EKPKASEAPS NLAVVGRYVL SADIWSLLEK TPPGAGNEIQ LTDAIAMLME KETVEAYHLK GVSHDCGNKL GYMQAFVEYG LRHDGLGQEF AQWLQETIEA EEK
|
| |