Gene PC1_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1980 
Symbol 
ID8132924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2273628 
End bp2274539 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content45% 
IMG OID644865270 
ProductUTP--glucose-1-phosphate uridylyltransferase subunit GalU 
Protein accessionYP_003017557 
Protein GI253688367 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.404534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTG TGAATAAAAA AGTAAAAAAA GCGGTCATAC CGGTTGCTGG ATTAGGGACG 
CGTATGCTGC CTGCCACCAA AGCCATTCCT AAAGAAATGT TGCCGTTGGT AGATAAGCCG
CTGATCCAAT ATGTTGTTAA TGAGTGTATC GCTGCAGGGA TTAATGAAAT TATTCTGGTT
ACACACTCTT CTAAGAATTC TATCGAAAAC CATTTCGATA CCAGTTTTGA GCTGGAAGCC
ATACTAGAAA AACGCGTTAA ACGTCAGCTG TTGGAAGAAG TTCAATCTAT CTGTCCTAAA
CACGTCACCA TTATGCAAGT GCGTCAGGGA TTAGCTAAAG GGCTGGGCCA TGCCGTATTG
TGCGCGCACC CGTTAGTGGG AGATGAACCC GTCGCAGTTA TTCTGCCGGA TGTGATTATT
GATGAGTATG CATCCGATCT GAAGAAAGAT AACCTGAGCG AAATGTTGCA ACGTTTTTCT
ACTACAGGCC ACAGCCAGAT TATGGTTGAG CCGGTTGAAA ATGTAAGCAG CTATGGCGTG
GTTGATTGCA AAGGTGTGGA ATTAAAAGCA GGGGATAGTG CACCTATGGT GGGCGTGGTT
GAAAAACCGA AAGCTTCCGA GGCACCGTCT AATTTAGCCG TCGTTGGCCG TTATGTACTC
TCTGCGGATA TTTGGTCCCT ACTGGAGAAA ACCCCGCCGG GTGCTGGCAA TGAAATTCAG
TTAACCGATG CCATCGCAAT GTTGATGGAA AAAGAGACGG TAGAAGCCTA TCACCTGAAA
GGTGTGAGCC ATGACTGTGG TAATAAATTA GGCTATATGC AGGCATTCGT GGAATATGGT
TTGCGCCATG ACGGTTTAGG TCAGGAATTT GCGCAATGGC TGCAGGAAAC GATTGAAGCA
GAAGAAAAAT AA
 
Protein sequence
MSIVNKKVKK AVIPVAGLGT RMLPATKAIP KEMLPLVDKP LIQYVVNECI AAGINEIILV 
THSSKNSIEN HFDTSFELEA ILEKRVKRQL LEEVQSICPK HVTIMQVRQG LAKGLGHAVL
CAHPLVGDEP VAVILPDVII DEYASDLKKD NLSEMLQRFS TTGHSQIMVE PVENVSSYGV
VDCKGVELKA GDSAPMVGVV EKPKASEAPS NLAVVGRYVL SADIWSLLEK TPPGAGNEIQ
LTDAIAMLME KETVEAYHLK GVSHDCGNKL GYMQAFVEYG LRHDGLGQEF AQWLQETIEA
EEK