Gene PC1_1961 details

Gene Information

• Locus tag: PC1_1961
• ID: 8132904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 2253004
• End bp: 2254938
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644865250
• Product: putative serine protein kinase, PrkA
• Protein accession: YP_003017538
• Protein GI: 253688348
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2766] Putative Ser protein kinase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.956203
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATAT TTGATCACTA CCGCCAGCGC TACGACGCTG CCAAGGACGA AGAGTTCACT 
CTGCAGGAAT TCCTTACCAT CTGTCAGCAG GATCGCAATG CTTATGCGAA CGCCGCTGAA 
CGATTGTTAA CGGCTATCGG TGAGCCTGTA ATGGTGGATA CCGCCCAAGA ATCACGAATG 
TCGCGCCTAT TCTCGAACCG GGTGATTGCT CGCTATCCGG CTTTTGAAGA ATTTTACGGT 
ATGGAAGAGG CCATCGAACA GATTGTGTCT TACCTGAAAC ATGCCGCGCA GGGATTAGAA 
GAGAAGAAAC AGATCCTGTA TCTGTTGGGA CCGGTCGGCG GCGGGAAATC CTCTCTGGCC 
GAACGCTTGA AAGCACTGAT GCAACGTGTA CCGATTTACA TCCTCAGCGC CAACGGCGAG 
CGCAGTCCGG TGAATGATCA CCCGCTCTGC CTGTTCAATC CGCAGGAAGA TGCCGCAATA 
CTCGAAAAAG AGTATGCCAT TCCACGGCGC TATCTCGGCA CCATCATGTC ACCGTGGGCG 
GCCAAACGCC TGCAGGAATT TGGTGGAGAC ATTTCCAAAT TCAAAGTCGT CAAAGTATGG 
CCATCGATTC TGGCACAAAT CGGGATCGCG AAAACCGAAC CTGGCGATGA GAACAATCAG 
GATATTTCAG CGCTGGTCGG CAAAGTCGAT ATTCGCAAGC TGGAGCATTA TGCTCAGAAC 
GATCCCGATG CTTACGGTTA CTCCGGCGCA TTGTGCCGCG CGAACCAGGG CATTATGGAG 
TTCGTCGAGA TGTTCAAAGC GCCGATCAAG GTGCTCCACC CGCTCCTGAC CGCGACACAG 
GAAGGCAACT ACAACGGGAC GGAAGGCATT GCCGCCCTGC CGTTTAACGG GATTATCCTG 
GCGCACTCCA ACGAATCCGA GTGGGTGCAA TTCCGTAACA ACAAGAACAA TGAAGCGTTT 
CTTGACCGCG TGTACATCGT GAAGGTGCCG TACTGCCTGC GCGTGTCCGA AGAGGTCAAA 
ATTTACGACA AGCTGCTGAA TCACAGCGAG CTGACGCATG CACCTTGCGC GCCCGGCACC 
CTGGAAACAC TGGCTCGTTT CTCCATTCTG TCGCGCCTGA AAGATCCCGA AAACTCCAGC 
ATCTACTCCA AGATGCGGGT TTACGACGGA GAAAGCCTGA AAGATACCGA TCCGAAGGCG 
AAATCCTATC AGGAGTACCG CGATTACGCG GGCGTAGATG AAGGGATGAA CGGCCTGTCG 
ACCCGCTTCG CGTTCAAGAT TTTGTCACGC GTCTTTAACT TCGATCACAG CGAAGTCGCC 
GCCAACCCAG TGCACCTGTT CTACGTACTG GAACAACAGA TCGAGCGCGA ACAGTTCCCG 
CAGGAGCAGG CAGAGAAGTA TCTGGAGCAC CTGAAAGGCT ATCTGACGCC GAAATACGCG 
GAGTTTATCG GCAAAGAGAT CCAGACCGCC TATCTCGAAT CCTATTCCGA ATATGGCCAG 
AATATTTTTG ACCGTTATGT TACCTATGCG GATTTCTGGA TTCAGGATCA GGAGTACCGT 
GACCCAGATA CGGGCCAGCT GTTTGACCGT GAATCATTGA ACGCTGAGCT GGAAAAGATC 
GAGAAACCTG CAGGTATCAG TAACCCTAAA GACTTCCGTA ACGAGATCGT CAACTTTGTC 
CTGCGCGCCC GTGCCAATAA TAGCGGCCGG AATCCAAACT GGACCAGTTA CGAGAAGCTG 
CGCACGGTCA TTGAGAAGAA AATGTTCTCC AACACGGAAG AGCTGTTGCC TGTGATTTCG 
TTTAATACCA AGACCTCAAC GGATGAACAG AAAAAACATG ATGACTTCGT CGATCGTATG 
ATGGAGAAAG GCTACACCCG GAAGCAGGTA CGTTTGCTGT GCGAATGGTA TCTGCGGGTG 
AGGAAATCAT CATAA 

 

Protein sequence

MNIFDHYRQR YDAAKDEEFT LQEFLTICQQ DRNAYANAAE RLLTAIGEPV MVDTAQESRM 
SRLFSNRVIA RYPAFEEFYG MEEAIEQIVS YLKHAAQGLE EKKQILYLLG PVGGGKSSLA 
ERLKALMQRV PIYILSANGE RSPVNDHPLC LFNPQEDAAI LEKEYAIPRR YLGTIMSPWA 
AKRLQEFGGD ISKFKVVKVW PSILAQIGIA KTEPGDENNQ DISALVGKVD IRKLEHYAQN 
DPDAYGYSGA LCRANQGIME FVEMFKAPIK VLHPLLTATQ EGNYNGTEGI AALPFNGIIL 
AHSNESEWVQ FRNNKNNEAF LDRVYIVKVP YCLRVSEEVK IYDKLLNHSE LTHAPCAPGT 
LETLARFSIL SRLKDPENSS IYSKMRVYDG ESLKDTDPKA KSYQEYRDYA GVDEGMNGLS 
TRFAFKILSR VFNFDHSEVA ANPVHLFYVL EQQIEREQFP QEQAEKYLEH LKGYLTPKYA 
EFIGKEIQTA YLESYSEYGQ NIFDRYVTYA DFWIQDQEYR DPDTGQLFDR ESLNAELEKI 
EKPAGISNPK DFRNEIVNFV LRARANNSGR NPNWTSYEKL RTVIEKKMFS NTEELLPVIS 
FNTKTSTDEQ KKHDDFVDRM MEKGYTRKQV RLLCEWYLRV RKSS