| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1937 |
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| Symbol | |
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| ID | 8132880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2231567 |
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| End bp | 2232691 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865226 |
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| Product | ribonuclease D |
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| Protein accession | YP_003017514 |
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| Protein GI | 253688324 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000913636 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATTATC AGTTGATCAC TTCCAACATC GGGTTACAAC AGGTTTGCGC CCAGGCGCGA
CGTTTTCCGC AGGTGGCATT GGACACGGAG TTCGTCAGAA CCCGCACGTA TTACCCGCAA
TTAGGGTTGA TTCAATTGTA TGACGGCGAA CAGCTTTCAC TTATTGACCC GCTAACGATT
ACCGACTGGG CTCCTTTTCA GGCGTTACTG CGTGATGAGC AGGTCACAAA ATTCCTGCAT
GCGGGCAGCG AAGATCTGGA AGTGTTTCTC AATGCGTTTG GAACACTGCC GGTGCCGTTC
ATTGACACAC AGATTCTGGC CGCATTTTTA GGTAAGCCGC TTTCCTATGG CTTCGCTGCG
CTGGTGGCGG ACTATATGGG CGTGACGCTG GATAAAAGCG AGTCGAGAAC GGACTGGCTT
GCTCGCCCGT TGAGCGAAAA ACAGTGCGAT TACGCGGCCG CCGATGTGTT CTACCTGTTG
CCAATGGCCG CGCAGTTAGT GGCGGATACG GAAGCCGCAG GGTGGATGAA CGCTGCGTTG
GACGAATGTC TCCTGCTTTG TCAGCGTAAA CAGGATATTT TGGCACCGGC GCTCGCCTAT
CGCGAATTTG GCAATGCCTG GCAGTTGCGT GGCCGGCATC TGGCTTGCCT ACAGCGTCTG
GCTGAGTGGC GCTTGCGTAA AGCGCGTGAG CGAGACAGCG CGGTGAATTT TGTCGTACGT
GAAGAGAACC TGCTGCAGGT GGCGCGTTGT TTGCCAACTT CGCTGGGTGA ACTGAGCTCA
CTGGGGCTGA GCGGCCCGGA AATTCGCTAC CACGGGAAAA CGCTGCTGGA CTGTGTTGCA
CAAATGGACG GTATTAGTGA CGCGGATTGC CCGCCACCGG TCATTAATTT GATCGACTAT
CCCGGCTATA AAAAAGCGTT TAAAGATATC AAAGCGCTGG TACAGCGCGT GAGCGAACAG
AGTGGATTAT CCGCCGAGTT ATTGGCATCA CGTCGTCAAA TTAACCGTCT GCTGAACTGG
CACTGGAAAT TAAATGGGCA AGACGCAGGG ACCCCGGAAA TGTTATCTGG CTGGCGCGGT
CAGTTATATG GCGATGAACT ACGTGACATT GTGCAAGGCT ATTAA
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| Protein sequence | MNYQLITSNI GLQQVCAQAR RFPQVALDTE FVRTRTYYPQ LGLIQLYDGE QLSLIDPLTI
TDWAPFQALL RDEQVTKFLH AGSEDLEVFL NAFGTLPVPF IDTQILAAFL GKPLSYGFAA
LVADYMGVTL DKSESRTDWL ARPLSEKQCD YAAADVFYLL PMAAQLVADT EAAGWMNAAL
DECLLLCQRK QDILAPALAY REFGNAWQLR GRHLACLQRL AEWRLRKARE RDSAVNFVVR
EENLLQVARC LPTSLGELSS LGLSGPEIRY HGKTLLDCVA QMDGISDADC PPPVINLIDY
PGYKKAFKDI KALVQRVSEQ SGLSAELLAS RRQINRLLNW HWKLNGQDAG TPEMLSGWRG
QLYGDELRDI VQGY
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