| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1902 |
|---|
| Symbol | |
|---|
| ID | 8132845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2195048 |
|---|
| End bp | 2196010 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644865191 |
|---|
| Product | pectin acetylesterase |
|---|
| Protein accession | YP_003017479 |
|---|
| Protein GI | 253688289 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.501568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTTC GTTCTCTGCT TGTCGGGGCC ATTATGATGT CTGTAAATGG ATTCAGTTAC
GCCCAACCTG TTTTTCCTGT CTGGCCACAC GGCGAAGCGC CGGGAGCCTC TTCTTCAACG
GCACAGCCGC AACTGGTCGA ACGAAGCAAA GATCCTTCTC TTCCCGATCG GGCAGCAACC
GGTATCCGCA GCCCTGAAAT TACCGTTTAT CCAGCAGAGA AGCCCAATGG CATGGCATTG
CTCATTACAC CAGGCGGCTC TTACCAGCGC GTGGTGTTGG ATAAGGAAGG CAGCGATCTG
GCCCCTTTCT TTAATCAGCA GGGATACACG CTTTTTGTGA TGACCTACCG TATGCCCGGT
GAAGGCCATA AAGAAGGCGC TGATGCTCCA TTGGCCGATG CACAGCGTGC TATAAGAACC
TTGAGAGCCA ACGCTGAGAA ATGGCACATT AACCCGCAGC GCATCGGTAT TATGGGGTTT
TCCGCCGGTG GTCATGTTGC TGCCAGCCTC GGAACCCGAT TTGCGCAGTC CGTTTACCCC
GCGACAGACG CCATTGATAG CGTAAGTGCA CGTCCTGATT TCATGGTGCT GATGTACCCC
GTGATTTCGA TGCAGGCGGA TATTGCACAT GCAGGCTCGC GCAAACAGTT GATCGGCGAA
CAGCCGACAG AAGCGCAGGT GCTGCGTTAC TCTCCAGAGA AACAGGTTAC CGCGCAAACG
CCCCCTACGT TTCTGGTGCA TGCGGTTGAT GACCCTTCGG TATCGGTTGA TAACAGTCTG
GTGATGTTCA GCGCACTGCG GGCAAAACAA ATTCCGGTTG AAATGCATCT CTTTGAGAAA
GGTAAACACG GTTTCGGCCT GCGCGGTACC AAAGGGCTGC CTGCCGCTGC CTGGCCTCAG
CTTCTGGACA ACTGGCTGCG TGTTTTACCG GTAAGCACAG AACAGCCGAA AGCCGTGCCA
TAA
|
|---|
| Protein sequence | MIVRSLLVGA IMMSVNGFSY AQPVFPVWPH GEAPGASSST AQPQLVERSK DPSLPDRAAT
GIRSPEITVY PAEKPNGMAL LITPGGSYQR VVLDKEGSDL APFFNQQGYT LFVMTYRMPG
EGHKEGADAP LADAQRAIRT LRANAEKWHI NPQRIGIMGF SAGGHVAASL GTRFAQSVYP
ATDAIDSVSA RPDFMVLMYP VISMQADIAH AGSRKQLIGE QPTEAQVLRY SPEKQVTAQT
PPTFLVHAVD DPSVSVDNSL VMFSALRAKQ IPVEMHLFEK GKHGFGLRGT KGLPAAAWPQ
LLDNWLRVLP VSTEQPKAVP
|
|---|
| |